Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0464 |
Symbol | |
ID | 5412156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 447592 |
End bp | 448767 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867676 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001403625 |
Protein GI | 154150007 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000813443 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACATTTG CCTTTGCCCG ACGCATTCAG CATGCCCCGT CATCGTTTTT GGGGGAGCTG TTCCGGGTCT CTTCAGATCC GTCCATTATC TCGTTTGCCG GGGGGCTGCC CTCATCGGCG CTGATAGATA CAGACGGGCT TCGCACCGCT GCACAGGATG TGCTTACCAC CGACCCGCGC GCCGCCCTCC AGTACTCGAC CACGGACGGT TACCGTCCGT TGCGGGAGTA TATCGCAGCA CGGTACGGGT CACGGCTGGG CGTCCCGGCC ACCGCTGATG AGATCCAGAT AACCAACGGC TCCCAGCAGT GCCTCGATCT TTTTGCAAAG ATCTTCCTTG ATCCGGGGGA CTACGTGGGC ATGGAGCGGC CGGGGTATCT CGGGGCTATC GAGGCGTTCT CGCTCTATGA ACCGGCCTTT ACTGCAGTTC CACTGGATCG CGAGGGTCCG AAACCGGAAG CATTTGCAAA GATGATGCAC GATACACCGG TCAAATTCTT CTACGGCATC CCTAACTCCC AGAACCCCTC CGGCTGCACG TACTCACCGG AGCGGCGCAA GGAAATCGCG GAGATGATCG CAGGAACCAG TACCGTTTTT TACGAGGATG ACGCGTTTGG CGAGCTCTTT TTTGACAAAA AATCTCGGAT CCCGGTCAAA AAATTTATCC CGGAAAATAC CGTTATTGCC GGATCGTTTT CCAAGATCAT CGCTCCGGGG ATGCGGATCG GATGGCTGTA CGCCCCGCAG GAGATCCTGT CAGCCTTCAA CACCGCCAAG CAGGCTGCCG ACCTGCATTC GAATTTCCTC TGCCAGCAGA TCCTGTACCG CTACCTCTCC ACAAACGATC TTGACTCCCA TATCCACAGG ATCGTTGAAG TCTATTGCCG ACAGTGCCGG TTGATGTGCG AGCTCTTCGA TGACCTGATG CCGGCCCTTG CCCACACGAC CCCGGAAGGG GGAATGTTCC TGACTGCCAC GCTGCCACAC GATCTGGACG CGATGGACGT CTTCTATGAG GGAATCCGAC ACAAGGTCGC GGTGCTGCCC GGGATGCCGT TCTTTGTAGA CGGGGGAGGT ACCGACACTA TCCGGCTCAA CTTCTCAAAC GCTGACGAGG AAAAGATCGC GGAAGGAATG CACCGGCTCG TCGCGGTGAT CCGTGAGCTG TCCTGA
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Protein sequence | MTFAFARRIQ HAPSSFLGEL FRVSSDPSII SFAGGLPSSA LIDTDGLRTA AQDVLTTDPR AALQYSTTDG YRPLREYIAA RYGSRLGVPA TADEIQITNG SQQCLDLFAK IFLDPGDYVG MERPGYLGAI EAFSLYEPAF TAVPLDREGP KPEAFAKMMH DTPVKFFYGI PNSQNPSGCT YSPERRKEIA EMIAGTSTVF YEDDAFGELF FDKKSRIPVK KFIPENTVIA GSFSKIIAPG MRIGWLYAPQ EILSAFNTAK QAADLHSNFL CQQILYRYLS TNDLDSHIHR IVEVYCRQCR LMCELFDDLM PALAHTTPEG GMFLTATLPH DLDAMDVFYE GIRHKVAVLP GMPFFVDGGG TDTIRLNFSN ADEEKIAEGM HRLVAVIREL S
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