Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0462 |
Symbol | |
ID | 5412154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 445268 |
End bp | 445945 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640867674 |
Product | hypothetical protein |
Protein accession | YP_001403623 |
Protein GI | 154150005 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00534353 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACAAA ACTGCTCACG AACAACAAAA TGTATCGCTG CTGCCATTGT TGCGGTGGTG ATAATCTCGG CGCTTACGGC GTTTGCCTAC TACAAATCAA ATGAAACGCT CAAAAATACC GCACAGTGGG GCCTTGAATC CACTGCCGGC GTCATGGCTA CGCAGATCAA CGCAAGCGAG ATCCAGGATC TCAAACCGGG AGACGAGAAC ACGCCCCAAT ACCAGGCTGT TGCTGCAAAA CTGAGGAATA TGCGAAGTAT GGACGACCAC CTCCTCAATG CATATATCCT CAAGGTGAAC ACAACGGATA TGTCAACCTC GTTCCTGGTA GACGATCTCT ACCCGCTGGA CCCGTCAGGA TCCGCAAAGA TCGGCGAGGT CTACAATCCG CCGGATAAGC GGGAGATCCT TGAGGCACTC TCGGGCCCGA CCGCGTCTCC GGCCCCGTAT ACCGATCAGT GGGGTTCGTT TGTGTCGGCG TATGCCCCCA TCGATGACTC TGCCCTGAAT TCCAACGGCA ACACGTATGC GGTCCTCGGC CTCGATGTAT CGGCAGATGA GTACACCTCG GTAACAGACC AGGACACCTG GATTATTCTG TCCGGTGTAA TCTCCATTAT CGTTGTTCTT GGGTTAATCT TCATTCTTGG CCGCAAAGCA GCCGCAGATG AGACTTAG
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Protein sequence | MAQNCSRTTK CIAAAIVAVV IISALTAFAY YKSNETLKNT AQWGLESTAG VMATQINASE IQDLKPGDEN TPQYQAVAAK LRNMRSMDDH LLNAYILKVN TTDMSTSFLV DDLYPLDPSG SAKIGEVYNP PDKREILEAL SGPTASPAPY TDQWGSFVSA YAPIDDSALN SNGNTYAVLG LDVSADEYTS VTDQDTWIIL SGVISIIVVL GLIFILGRKA AADET
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