Gene Mboo_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0438 
Symbol 
ID5411871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp419232 
End bp420095 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content57% 
IMG OID640867651 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_001403600 
Protein GI154149982 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.285486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAGAGA CTGGCACAAC TGAACCTGCA GGAAAAGTAC CGAACCATCT TGTCGGTGTA 
ATCGTTACCT GGAGGGCTAT CACCCATCAG GGCCTGACGC GATCGCAGAA CGAGGATGCG
CACTGGGTTA CCCATGTAGT CGAAGGAACA ACCGGCACCG AGTCGGCCTC ACGGTATGTC
TTTGTCGTGG CCGACGGCCT TGGAGGGCAC CGGGGCGGTG CGGTTGCAAG CAGGATGGCA
ATCAAGGCCA TAAAAGAGGA GATCCACTCG TGGCACGGCG GGAATGCAGA GCGCACCATA
GAACGTGCAA TCCAGAAAGC AAACCAGAAA ATTTTCTGTG TTGCCCAGAC CGACCCGGAA
CTCTTCCAGA AGATGCAGAC AACGATCACC CTTGTTGTGT TGGAAAACGA TTCGCTTGTC
TGCGGCCACG TAGGCGACTG CCGGCTCTAC CGCATGCGGG AGGGACAGGT AAACGTGCTG
AGCCGGGACC ATACCCTGGC AAGCGACATG CTCCAGCTCC ACCTGATCTC CGCAGAACAG
GCCGCAGAGC ACCCGGGCCG GCACCAGCTC ACCCGTTCTG TCGGGGGTGA TCCGTTCTTA
AAGACCGATG TATTCCGGCA GCAGGCAATG CCGGGTGATA CCTATCTGCT CTGCAGCGAC
GGGTTATGGT CAGAATTAAA AGAAGAAGAG ATCCGGGCCG CACTTGAGGG GCCCGATATC
AGCCGGGAAT GTGAAAAACT GGTCAGGTTT GCCCTGTCCG GGGGAGCCCC GGATAATATC
ACGGCGATCA TGTTCCGTAT CGATGTTGTT GGAAAACAGG CTGCGTCCCC GTTCTCCTGG
CGCTCACTTC TGGGGAAAGG ATAA
 
Protein sequence
MGETGTTEPA GKVPNHLVGV IVTWRAITHQ GLTRSQNEDA HWVTHVVEGT TGTESASRYV 
FVVADGLGGH RGGAVASRMA IKAIKEEIHS WHGGNAERTI ERAIQKANQK IFCVAQTDPE
LFQKMQTTIT LVVLENDSLV CGHVGDCRLY RMREGQVNVL SRDHTLASDM LQLHLISAEQ
AAEHPGRHQL TRSVGGDPFL KTDVFRQQAM PGDTYLLCSD GLWSELKEEE IRAALEGPDI
SRECEKLVRF ALSGGAPDNI TAIMFRIDVV GKQAASPFSW RSLLGKG