Gene Mboo_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0422 
Symbol 
ID5410143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp406331 
End bp407368 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID640867635 
Producthypothetical protein 
Protein accessionYP_001403584 
Protein GI154149966 
COG category[C] Energy production and conversion 
COG ID[COG1456] CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG GACACTGTTC GTGCGATTGC TCACCGCAGG TTCCCGGGGG AGTACAGGAA 
TTCCTGTACG CAAGCCCGGC GATCACCTTT GCCGACCGGT GGGACCACTT CAAGGCACGC
TGGGGCGTAC ACCGGATGGG CCACATTGTA CAGCCCGGCC TGTACAAGCT GGGGCTTGCC
ACCCCGGAAT CCCCGGTGAT AGTGACTGCA AACTATACGC TCAGCTTCGA TGCGGTCCGG
TCCGCTCTTG GCAGGACCGA TGCCTGGATC CTTGTCCTTG ATACAAAAGG CGTAAATGTC
TGGTGCGCTG CCGGGAAAGG GACTTTTGGG ACCGGGGAAC TCATCCGCCG GATTGCACTG
ACCGGCCTTG CATCGGTTGT CAGCCACCGG ACGCTCGTTC TCCCCCAGCT TGGCGCTCCC
GGGGTCTCGG CCCACGATGT GCAAAAATTC ACCGGGTTCC ATGTGGAGTA CGGCCCGGTC
CGGGCACGCG ATCTCCCGGA ATATCTCCGG ACACGCATGG CAACCCCGGC GATGAGGAGG
GTGGAGTTTA CCCTCCGGGA CCGGCTCGTG CTTACGCCGG TAGAGTTTGT TTTTGCTGCG
CTCCCGATGG TGATTGCCGC ACTTGTCCTC TTCTTCCTTG CCGGTCCCAT TGCAGCGCTT
GCCGCAGTGG CAGCAGTCCT TGCCGGCACC GTCCTCTTCC CGGCCCTGCT CCCATGGATC
CCGGCAAAGG ACTTTTCCAC CAAGGGCTTC CTGCTCGGGT TTGTGGTCGC CCTTCCGTTT
GCAGCATTCT TCTCATCCCG CGTGCCGGCG ACCGACGGCC TGCCCGTGAT CGCAGGACTT
ATCCCGCTCT TCCTTTTTTC GGCCATTGTC GGGTACCTTG CCCTCAACTT CACGGGCTCG
ACCACGTTTA CCTCGCGGAC CGGGGTAAAA AAAGAGATCT TCCGGTACGT GCCGGTCATG
GCGCTGCTTG CAGGCCTTGG CATCGCCTGC TGGGCAGTGG CCGGGCTTCT CCTGTACCTG
GGGGCCGGCC ATGCCTGA
 
Protein sequence
MAKGHCSCDC SPQVPGGVQE FLYASPAITF ADRWDHFKAR WGVHRMGHIV QPGLYKLGLA 
TPESPVIVTA NYTLSFDAVR SALGRTDAWI LVLDTKGVNV WCAAGKGTFG TGELIRRIAL
TGLASVVSHR TLVLPQLGAP GVSAHDVQKF TGFHVEYGPV RARDLPEYLR TRMATPAMRR
VEFTLRDRLV LTPVEFVFAA LPMVIAALVL FFLAGPIAAL AAVAAVLAGT VLFPALLPWI
PAKDFSTKGF LLGFVVALPF AAFFSSRVPA TDGLPVIAGL IPLFLFSAIV GYLALNFTGS
TTFTSRTGVK KEIFRYVPVM ALLAGLGIAC WAVAGLLLYL GAGHA