Gene Mboo_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0417 
Symbol 
ID5410138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp401631 
End bp402566 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID640867630 
Producthypothetical protein 
Protein accessionYP_001403579 
Protein GI154149961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCC CTGTCCGCAT CGTCCGCGTC CTTTTGTATG CACTTGCGAT AACCACACTC 
GTCCTGTCTG CGGTCTGCAT AAGCGGCTGT GTGGGCAGTT CCGGTACGTC ACCGGGTGAA
ACGGCTGCCG GTCCCGGTAC GGCGCCGGCA TGGCGAATCG ATCATGCGGT CATTGTCGTG
GATAACCTCA CGGAGGCCCG CGAGCGTTTT GCAGCTGCGG GTTTCTCCGT TGTCGCCGGC
GGCGAGCACG GGGGCAATGA CACCGAAAAC GCCCTTGTGC CGTTTGAAGA CGGCAGTTAT
CTGGAACTCT TTGCCCCGGT GAACCCTGCA ATGGCAACAG AGATGAAGGC GCTTGTTGCC
TCGGGAACGT TTGATGCCGC CATGCAGCAG GAGAATGCGA TGGACTCGCG CTTCATGCGG
CATCTTGCCG ACGGGCCGGG CCCCGAGGAC TTTGCCCTCT CCTCTCCCGG GCTCAATTTG
TCCGCTGCAC AGGCCGATGC AGGGCAGCAG GGAATTATCC TTGCCGGGCC GATCCCGATG
TCAAGGACAC GCCCGGACGG GATCGATGTG AAATGGCACG TTGATGTCCC GGTTTCCGGG
GACACCGCGG CCGTGCCGTT CCTTATCGCA GACGACACTC CCCGGTCCTA CCGGGTGCCG
GGCGGTGCGG ATGCAATGCA GCCCAATAAC GTGACCGGGA TCAAGCGCAT CGTTATCAGG
ACACAGGACC AGGAAAATGT CACCCAGTGG TACGATACGG TGCTTCCCGG TGTGCCGGCA
TCCACAAACG GTTCGGCCAC TACGTACATG CTGAACGGTT CGACAATTGA GGTCCGGCAG
GGAGCGGCCG GGACGCAGCA GGACGGGATT GCCGAAATTG TGCTTGCACA AGGATCGGGC
GGAGAGCTCG TTCTCGATAA CAGCACCTGG GAGTGA
 
Protein sequence
MASPVRIVRV LLYALAITTL VLSAVCISGC VGSSGTSPGE TAAGPGTAPA WRIDHAVIVV 
DNLTEARERF AAAGFSVVAG GEHGGNDTEN ALVPFEDGSY LELFAPVNPA MATEMKALVA
SGTFDAAMQQ ENAMDSRFMR HLADGPGPED FALSSPGLNL SAAQADAGQQ GIILAGPIPM
SRTRPDGIDV KWHVDVPVSG DTAAVPFLIA DDTPRSYRVP GGADAMQPNN VTGIKRIVIR
TQDQENVTQW YDTVLPGVPA STNGSATTYM LNGSTIEVRQ GAAGTQQDGI AEIVLAQGSG
GELVLDNSTW E