Gene Mboo_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0409 
Symbol 
ID5410317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp394415 
End bp394876 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID640867623 
ProductMarR family transcriptional regulator 
Protein accessionYP_001403572 
Protein GI154149954 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGA TAGAAAATAA TTCAGTTACC CGATGGATTC AGGATATTAA AATTCCGGCG 
CCATTGATTT CATATTCCTA CCGCGCTCTC CAGAAAAAAT TTGCAAAAGA ACTTGCACCC
TATCATATTG GATGGGGACA TTTTGTGATC CTTATGTCCC TGTACGATAA TGAAGGAAGC
AGCCAGGACG ATCTTGCATT GTCACGGGGT TTTGACAAAA CCATGATTGC AAAATCTGTT
GTGAAACTGG AAGAGGAAGA TCTCATCCGG CGCAAAACCG ATCCATCAGA CAGACGGGTA
AAACGGCTGT ATCTCACGGA TAAAAGCAGG GAACTTATTC CGGAGCTTGA ACAAATCGGG
CTGGGAATAA ACAAAATACT CTTCAAGGAC TTGGATGAGA AAGAGTCAGA AGTTATCCTT
GAGCATTTTC GTAAAATTGC TCTGAATGCA TCGGAGATGT AA
 
Protein sequence
MSPIENNSVT RWIQDIKIPA PLISYSYRAL QKKFAKELAP YHIGWGHFVI LMSLYDNEGS 
SQDDLALSRG FDKTMIAKSV VKLEEEDLIR RKTDPSDRRV KRLYLTDKSR ELIPELEQIG
LGINKILFKD LDEKESEVIL EHFRKIALNA SEM