Gene Mboo_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0406 
Symbol 
ID5410314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp392009 
End bp392782 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID640867620 
Producthypothetical protein 
Protein accessionYP_001403569 
Protein GI154149951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA CGAATTTCCG CGAGATCGGA TCGAAACTCG CTGCAGCGTT TTGCCTCTCC 
ACTCGTCCCT TGGCGGTGTA CGGGTCAGAA ACACTCCCTG CCGGCATCTC CCCCATGGCC
GGGATCAACC GGTGCTTTGC AGTCTCCCTG TACCGGATAG CGACCGGGCG AGAGATCCCG
GGGAGCTACA TCGGGGCCGG TGCAACGGAA GGCTGTTGCA TGGGCGGGCT GTTTCACACG
GGATACATCA CGGTGCCTGA AGATATCAAA TACTTCGTCT CGACCGGCAG GAAGGATGTC
CGCGGTGGGG CAGCGGAGTA CCTGAAAGCA AGCCCGGATC TGGTCGACCG CTGCTCGGCG
GCAGCCGGGC CGATCCACCC GCCGGGGAAG TATCTCGTTG TCCAGGCCTG CGAAGCTCTC
CCTGATCCTT TGCCAAACGT CCTCTCCCTC TGCATCTTCG GGAATGGCGA GCAGATCCGG
AACATGGCGG CGCTCATCCA TTTCGACCGG GACGACCCGT TCTCTCCGGT CATTGTCCCG
TGGGGGTCGT CCTGCTCAAC GTTCATCACC TTCCCGGCCG GCCTTGCAGA GAAAACGCCC
AAAAACACAG CCTTCATGGG TCCGCAGGAT CCCACGCAAA ACCATTCGCT CCCGCCGGAG
ATGATGGCGC TTGGAATCCC TGCAGAGATG GCCGTGCGGA TGGCAAAGAA TCTCGATGCT
TCGTTTATTA CCCGGCGGCC TTATGTCGCA TTTCCCCGCC ATGCGGCAAA GTAA
 
Protein sequence
MTNTNFREIG SKLAAAFCLS TRPLAVYGSE TLPAGISPMA GINRCFAVSL YRIATGREIP 
GSYIGAGATE GCCMGGLFHT GYITVPEDIK YFVSTGRKDV RGGAAEYLKA SPDLVDRCSA
AAGPIHPPGK YLVVQACEAL PDPLPNVLSL CIFGNGEQIR NMAALIHFDR DDPFSPVIVP
WGSSCSTFIT FPAGLAEKTP KNTAFMGPQD PTQNHSLPPE MMALGIPAEM AVRMAKNLDA
SFITRRPYVA FPRHAAK