Gene Mboo_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0400 
Symbol 
ID5411416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp385029 
End bp385253 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content53% 
IMG OID640867614 
Producthypothetical protein 
Protein accessionYP_001403563 
Protein GI154149945 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.908801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAAA AATACCAGGT TGTCATTGAA CCCGGCGAGG ACGGCTGGTT GGTGGTCACT 
GTTCCGGCCC TGCCCGGCTG TATCACTCAG GGAAAAACGA TCTCAGAATC GGAAGCAAAT
GCCAGGGAAG CCATCGAAGG ATACCTTGAA TCGCTCATCA AACACCAGAG AAAAGTACCC
GATCAGCGCC GGGTACGTAT CCGCGAAATC GCTGGAGAAG TATGA
 
Protein sequence
MQKKYQVVIE PGEDGWLVVT VPALPGCITQ GKTISESEAN AREAIEGYLE SLIKHQRKVP 
DQRRVRIREI AGEV