| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0388 |
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| Symbol | |
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| ID | 5410619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 376396 |
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| End bp | 377796 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640867602 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001403551 |
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| Protein GI | 154149933 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00816882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAT CCAACTTGCC TCAACCCGCC GAAAGTAAAA TAGCGTTCGA CTGGCGGTTT
GTAACACCGC TGTATATCGG CTCCGCCCTC AATCCTGTCA ACACTTCGTT CATTGCCACT
GCCCTGGTGC CAATTGCAGC GGCCATCAAC GTTCCGGTCG GACAGACTGC TGTTCTTGTC
GCGGCACTCT ATATCGCATG TATCGTTGCC CAGCCGGCAG CCGGAAAATT ATCGGAGGCA
TTTGGGCCAC GGAGGGTGTT CCTTGCAGGT ATTCTCGCAG TACTTGCCGG AGGAGTGCTG
GGTGGATTAG GCCATGACCT CGCAACGCTG ATCGTATCAC GGGTCCTGAT TGGTGTGGGC
ACCTCGACCG GATATCCTTC GGCAATGCTT TTGATCCGAC AGCGGGCCGA ATCGGCCGGG
CTGACCGGGC CCCCGGGAGG AGTGCTTGGC GGCCTTGTGA TTGCCGGAAT GGCGACTGCG
GTTATAGGTC TGCCCATTGG CGGATTCCTC GTCGCCGCCT GGGGCTGGCA GAGCGTGTTT
TTTATTAACG TCCCGCTGGC TCTCGTGGCG CTCATTATGG CTGCATCTTG GATCCCCCGG
GATCCGCCAT GCAGGAGCAT AAAGACGCTC CGTGACCTGG CAACCCGCAT TGATCTGGCC
GGCATCACGG TCTTTAGTGG CGCGATGATT GCCCTTCTGG TCTTTCTCAT GTCACTGCCG
GATCCGGATT GGGTTGTTTT AGGCGTAGTT ATTCTGCTCG GTCTGGCCTT TGTCTGGTGG
GAAGGACAGG TGAGCCAGCC TTTTATTGAC CTCCGTCTGT TAGGAACGAA CCGGCCATTG
ATACTCACCT ATGTGCGCTT TGCCCTTGCG ATGCTGTGCG TCTACACCGT AATGTATGGT
GTCACGCAAT GGCTTGAGAT CGACAAAAAT ATTTCGTCCG CTGATGCAGG ATTCATCATT
TTGCCCATGA GTCTCATATC CATTGTGCTA GCGTGGCTGG TCTCGCGGCT GAACCTCGTG
CGCACTCCCC TTATTGTGTC TGCCGTTGCC TGCCTGGCAG GTTCTGCGGG CGTATTTTTA
TTCACCACGG CGACGCCGAT ACTCTGGATC GTTATAATCA CGGCGATCTT CGGGATTACC
ATGGGGATGT GTGCCAGTGC GAACCAGACA ACATTTTACA CCCAGGTAAC CGCAGATCAG
ATCGGTACCG CTTCAGGCCT GTTCCGTACT TTTGGGTATT TTGGCTCGGT TGCATCGTCG
GCCCTTATCG CGATATTCTT TAATCCCGAT GTCAGCGATC AGAGCCTGCA TTCAATTGCT
GCAGTACTGG TGATCCTCAG CGTTGTGGGA CTGCTTATTG TCATTGCCGA CAGGAAAATC
ATGGCTCTGG CAAAAGTATA G
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| Protein sequence | MNTSNLPQPA ESKIAFDWRF VTPLYIGSAL NPVNTSFIAT ALVPIAAAIN VPVGQTAVLV
AALYIACIVA QPAAGKLSEA FGPRRVFLAG ILAVLAGGVL GGLGHDLATL IVSRVLIGVG
TSTGYPSAML LIRQRAESAG LTGPPGGVLG GLVIAGMATA VIGLPIGGFL VAAWGWQSVF
FINVPLALVA LIMAASWIPR DPPCRSIKTL RDLATRIDLA GITVFSGAMI ALLVFLMSLP
DPDWVVLGVV ILLGLAFVWW EGQVSQPFID LRLLGTNRPL ILTYVRFALA MLCVYTVMYG
VTQWLEIDKN ISSADAGFII LPMSLISIVL AWLVSRLNLV RTPLIVSAVA CLAGSAGVFL
FTTATPILWI VIITAIFGIT MGMCASANQT TFYTQVTADQ IGTASGLFRT FGYFGSVASS
ALIAIFFNPD VSDQSLHSIA AVLVILSVVG LLIVIADRKI MALAKV
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