| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0387 |
|---|
| Symbol | |
|---|
| ID | 5410618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 375651 |
|---|
| End bp | 376346 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640867601 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001403550 |
|---|
| Protein GI | 154149932 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.084331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAG TACCGGGAAT TCACCAGATT GATGGGGTAA ATGGTAATTG TTTTATTATT
GTCCGGGACG AACTGACACT TATCGATACG GGAATGCCCA AAAACAGCAC AAAAATAATA
ACATATATTC AGGATGTTCT TAAGCGGAAA CCAACAGACA TCAAAACGAT CGTCCTGACA
CACTTTCATA TCGATCACGT GGGCGGCGCG AGCGAGCTCA AAAAACTGAG CGGCGCGAAA
GTGGCTATTC ACAAAAAGGA TGCGGACTAC GTTTCCGGCA GGAAAACCCC ACCTGTCCCG
AGGGGTGTTA AGGGAATGAT CGTTAAAGTT CTCATCCCCT TGTTTTTCGG ATCAAGGCCT
GTTGAACCGG ATATATATCT CAACGATGGT GACACCATCG CTGGTCTCAC CACCCTTCAT
ACACCCGGAC ATACACCGGG AAGTATCTGT CTTTTTGATC CGGTATCAAA AATCCTGTTT
GCAGGGGATC TGTTGAGGTT TGACGGGACT AACATCAAAA TGGGACCCCT CAATTTAGAC
CAGGGTGAGG AACAAAAATC AATCAATAAA ATTGCCGCAA TTGATTTCGA TATCATGTTG
TCGGGACATG GAATACCTCT GCGACCCGAG GCATCGGTAA AGATCAGGGA GTTCGCAAAG
AGAAATACCT GGAAAAATGG ATCCCCGGGA AAATGA
|
|---|
| Protein sequence | MEIVPGIHQI DGVNGNCFII VRDELTLIDT GMPKNSTKII TYIQDVLKRK PTDIKTIVLT
HFHIDHVGGA SELKKLSGAK VAIHKKDADY VSGRKTPPVP RGVKGMIVKV LIPLFFGSRP
VEPDIYLNDG DTIAGLTTLH TPGHTPGSIC LFDPVSKILF AGDLLRFDGT NIKMGPLNLD
QGEEQKSINK IAAIDFDIML SGHGIPLRPE ASVKIREFAK RNTWKNGSPG K
|
|---|
| |