Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0386 |
Symbol | |
ID | 5410617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 375060 |
End bp | 375539 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640867600 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001403549 |
Protein GI | 154149931 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.26449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGA ACGATGATTT TTGGCGATGG ATTGAGGCTG CACTGAATGT GATCGGAGGG AAGTGGAAAC TGCTGATCGT TATTGCATTA AGGGATGGGA CCCAGCGGTT TAGCGAGATC TCGCATAAGC TTCCGGCAAT CAGCGAGAGA ATGCTCGTTA AACAGCTCCG TGAGATGGAG CACGACGGTA TTATTACAAG AAAAGTTTAT CCGGTGGTCC CTGCGAAGGT TGAATATTCG CTTACGCAGT CTGGTGAAAA ACTGATTCCG GTTTTGAAGA TTCTGGGCAT ATGGAGTATA ATCTACCTTG GATCCGATGT TGCCGGTAAG GGGTTGTCCG AGCCAGTGAA AGTGGATCCC GGCAAACTCC GTCAACTGCT CGAAGATCTC GACGGTATCC TTCAGGACGC CGACAAAAAA ATAAAACGAC AAAGCAACAG AACCAGCCAA ACTATATCCA TAAACTCTGG AAAAAATTAA
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Protein sequence | MTKNDDFWRW IEAALNVIGG KWKLLIVIAL RDGTQRFSEI SHKLPAISER MLVKQLREME HDGIITRKVY PVVPAKVEYS LTQSGEKLIP VLKILGIWSI IYLGSDVAGK GLSEPVKVDP GKLRQLLEDL DGILQDADKK IKRQSNRTSQ TISINSGKN
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