Gene Mboo_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0386 
Symbol 
ID5410617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp375060 
End bp375539 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content46% 
IMG OID640867600 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001403549 
Protein GI154149931 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.26449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA ACGATGATTT TTGGCGATGG ATTGAGGCTG CACTGAATGT GATCGGAGGG 
AAGTGGAAAC TGCTGATCGT TATTGCATTA AGGGATGGGA CCCAGCGGTT TAGCGAGATC
TCGCATAAGC TTCCGGCAAT CAGCGAGAGA ATGCTCGTTA AACAGCTCCG TGAGATGGAG
CACGACGGTA TTATTACAAG AAAAGTTTAT CCGGTGGTCC CTGCGAAGGT TGAATATTCG
CTTACGCAGT CTGGTGAAAA ACTGATTCCG GTTTTGAAGA TTCTGGGCAT ATGGAGTATA
ATCTACCTTG GATCCGATGT TGCCGGTAAG GGGTTGTCCG AGCCAGTGAA AGTGGATCCC
GGCAAACTCC GTCAACTGCT CGAAGATCTC GACGGTATCC TTCAGGACGC CGACAAAAAA
ATAAAACGAC AAAGCAACAG AACCAGCCAA ACTATATCCA TAAACTCTGG AAAAAATTAA
 
Protein sequence
MTKNDDFWRW IEAALNVIGG KWKLLIVIAL RDGTQRFSEI SHKLPAISER MLVKQLREME 
HDGIITRKVY PVVPAKVEYS LTQSGEKLIP VLKILGIWSI IYLGSDVAGK GLSEPVKVDP
GKLRQLLEDL DGILQDADKK IKRQSNRTSQ TISINSGKN