Gene Mboo_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0345 
Symbol 
ID5409989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp336413 
End bp337666 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content59% 
IMG OID640867560 
Producthypothetical protein 
Protein accessionYP_001403509 
Protein GI154149891 
COG category[S] Function unknown 
COG ID[COG4709] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAA CTGAAAAAGA ATACCTGGAC ACGCTCAGGG ACCGGCTTAC CGGGTATCTC 
ACCGGTGAGG ACCTCGATGA AATCCTGGAA GAATATGCCG GGCATTTTGC CATCGGGAAA
TCCCGGGGCC GGACCGAAGA GGAACTCTGC CGGGCGCTGG GCTCGCCAGA AGATGTTGCA
AAAGAGATCC GGGCCGCGTA CCTGATCCAT AAGGCAGAGC AGACCAAGAG CGCCGGCACG
ATCTGGCGGG CAACCCGGGC AACGACTCAC ATTCACGGCC TTAACTTCGT TGCCGTGCTC
GTGCCGTTTA TCCTCTTTGC CGTGGTCTTT GGCCTGGTCT TTATCGCCGG CCTTGCACTG
ATCTGCGGAG GAGCAGTCCT GCTCCTTTTG GCACTCATCA AACTGCTGGG ACTTTCGCTC
ACTCTTCCCT GGCACCTCTC CCCGGCACCG GGGGTTCTTA CCTCCCTTGG GCTCTTTATT
GCCGGTATCA TCGTCGTGGT CCTGGACATA TGGCTGGCAC ATTTCTTCGG CCGCCTGACC
ATCCGGCACC TCAGGAATAA ACTCCCGGCA AAAAAAGATG CAGGATTCTT TTCGCCGCAG
CAGGCAATCC CCCAAACTAT TGCGATTGGC AGGGACGGTG CATCGGCACT CGACCTCCAG
GTGCACCTCA GTGCCGGCCA GCTCACCCTC GGAGAAGGTG CCGGGGACCC GGTCCTGATG
AACCTGACTG CCGGCAACGG GAGCAGCACG GGCCCCCTGG CGTATTCCGC CTCTATGGAC
GGCACAACAA AAAAAGTCTG GATCTGGAAC CGCCACGGTT GTTTCTGGTG GTCCGGACAC
GACTGGCCCG CAAACGAACC GGCGTACACC TGGGATATCC GGGTAAGCCG GGATGTCCCG
GTCGCGATTG ACGCAAAAAA CCACGCCGGC CGTACCCGTC TTGCCCTTGG GGAGCTCAAC
CTCTCTTCCC TGACCGTCAA AAACAGCGTC GGCGAGACAC AGATCGACCT TACCGGGTAC
CATGGCGGGG ATTTCAACGC CACCATCAAA AACGGTGTGG GGGAGCTGAC CCTGCGTATG
CCAAAAGACG CTCACCTGAG TGTAGAGATC CACGGGGGCA TCGGGGCCAC GAATGTGCGG
GGCTTTGTGG TAAACGGGAA TGTCTATACC ACCAGTTCGT CACGCCCGGA CGCACCCCGG
ATCACGTGCC GGATCAAACA GGGAGTTGGC TCGATCACCG TAGAGGCGGT GTAA
 
Protein sequence
MVTTEKEYLD TLRDRLTGYL TGEDLDEILE EYAGHFAIGK SRGRTEEELC RALGSPEDVA 
KEIRAAYLIH KAEQTKSAGT IWRATRATTH IHGLNFVAVL VPFILFAVVF GLVFIAGLAL
ICGGAVLLLL ALIKLLGLSL TLPWHLSPAP GVLTSLGLFI AGIIVVVLDI WLAHFFGRLT
IRHLRNKLPA KKDAGFFSPQ QAIPQTIAIG RDGASALDLQ VHLSAGQLTL GEGAGDPVLM
NLTAGNGSST GPLAYSASMD GTTKKVWIWN RHGCFWWSGH DWPANEPAYT WDIRVSRDVP
VAIDAKNHAG RTRLALGELN LSSLTVKNSV GETQIDLTGY HGGDFNATIK NGVGELTLRM
PKDAHLSVEI HGGIGATNVR GFVVNGNVYT TSSSRPDAPR ITCRIKQGVG SITVEAV