| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0343 |
|---|
| Symbol | |
|---|
| ID | 5409987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 334143 |
|---|
| End bp | 335528 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640867558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403507 |
|---|
| Protein GI | 154149889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.873352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCC ATTCCCCGCC AGCCGCGGAT AGTAAAGAGA GCATCATTGT CGTCTCGGAT
GTCCATCTCG GGGGAAACAT CGGATCCCAT CACGACAAAT TCTGTGATTT CCTTGCCTGG
ATCACCACGT TCCCCCAAAA AATTCCTGCA GTCCCGTGCG ATGAAAAGGA GGATGCCCGC
CCCGCAACGC TGGACATCGC ATTTGACCCG CTGACAAAAC TGGTCCTGCT CGGGGACATC
ATCGACCTCT GGGATCCAAA AGACCAGGAC CGGAAAAACG TTATCCTTGA ATCAGTCAGG
CCCCTGTCCC TTCTCCATGC CCTGCCCTGC GACAAGGTCT ATGTCACCGG GAACCACGAC
GCCGATCTCT GGGAGATGGT AAAAGACGAT GCTTCCCCGG ACAAACGGAG TTTTCCCTGG
AAAGACGGAT ACGATTTTTC GATCTACCCC CGCCATTACC CGCCCTCGGA AAAAACCGCA
GCAAAAGTAA ACCGGGGCGT CCCGGTAAAC CGGACGCATT ACACCTTCCT CCACGGCCAC
CAGTTCGACG GCGAGCAGGT CACCTATGTC ATCAGCGAGA TCCTAAAGGA GCCCTTTGAT
CCCATCGACA CTCTCATGGA CCTGGCCAAC ATGTCCGTAA GTAAAATCTT CCGGATCCCC
GCAGATATCC TGGTGTTCTG CCTGTGGGTC CTCTCGCTTG TCCTGGTGAC CTGGACGGTC
CCGTACGATG CCGTGGTAAA AAATGCCTTT GTGCTCGTGC TCTCCCTTGC AGTCGCCGTC
CCGCTCCTCT TGAAATTTCC CGCGGCACAA GCGGTGCTCG GGGAGAGAAA ACCCAAAGTG
TGGGAACGGG CCCTCATCGG GGGATTGTTC CTTGGTCCGT TTGTAGCGCT CGTCATCTAT
GGTGCGGCCT TTGCCGCAGG GCCGGGCATC CTTCCCGCAC CGGCATCCTT CCTCCTCCCG
GCCTATGCGG TAATCCTTAC CCTCTTTGCC CTTATTATCG TTGTACCCCG GCTCATCGGC
TGTGCACAGC GGAAAGTGTA CGGCCTTTTT GCATCCCGGG ACAAAACCGT TGAAGACGTT
CTCGATGACG GGTTTGTGGA CGAACGCGAC ACCATCAGGG CCGAAGTGAT CGTATTCGGG
CATACCCACC GGGCCGGGTA CGCAAAAAAG ACCTTTGCAC CCCCGGGCAA TCCCGCACAG
GAACGGTCGC CGGAAAAACT CTTTGTCAAT ACCGGGTGCT GGGCAGACAC GGGCGACACC
CGGCCGGTCG ATACCTTTGT GTACATCAAC CGGACCGGGC TGTACCTGCT GGAATGGAAA
GGGCCCGGAA AAATAAACTG CCTTTTCCAT GCTCCCCACG AACGGCTGCA TACCTTTGCA
CCATGA
|
|---|
| Protein sequence | MPGHSPPAAD SKESIIVVSD VHLGGNIGSH HDKFCDFLAW ITTFPQKIPA VPCDEKEDAR
PATLDIAFDP LTKLVLLGDI IDLWDPKDQD RKNVILESVR PLSLLHALPC DKVYVTGNHD
ADLWEMVKDD ASPDKRSFPW KDGYDFSIYP RHYPPSEKTA AKVNRGVPVN RTHYTFLHGH
QFDGEQVTYV ISEILKEPFD PIDTLMDLAN MSVSKIFRIP ADILVFCLWV LSLVLVTWTV
PYDAVVKNAF VLVLSLAVAV PLLLKFPAAQ AVLGERKPKV WERALIGGLF LGPFVALVIY
GAAFAAGPGI LPAPASFLLP AYAVILTLFA LIIVVPRLIG CAQRKVYGLF ASRDKTVEDV
LDDGFVDERD TIRAEVIVFG HTHRAGYAKK TFAPPGNPAQ ERSPEKLFVN TGCWADTGDT
RPVDTFVYIN RTGLYLLEWK GPGKINCLFH APHERLHTFA P
|
|---|
| |