Gene Mboo_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0335 
Symbol 
ID5409979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp325056 
End bp325736 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content56% 
IMG OID640867550 
ProductPEGA domain-containing protein 
Protein accessionYP_001403499 
Protein GI154149881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.250478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGA TCTGTGTGCC GCTTATTGTA TTCCAGCTAG TACTCCTGAT GGTGACTCCC 
GTATTCGCGG ACGGTGCCAA TGGAACAAAC ATAACGACTA TAACGGCCAC CCCGGCAACA
ATCGTAACAA CGATTCCTGC ATACCCGGTA AATACGACCG CAACCCCGGT TTTTGCAAAT
GCAACTGCCG TGCCGGTAGC AACGAATACC ACCGTTCCCA CGGAGACTGC CGCAGTACCC
ACAGGAAATA CGGGTGCCCC GTCGACCGGT AACCTGAGCG TGGCCTCGTC TCCCCTGGGG
GCAGACATCC TCATTGACGG AGTCCTCTAC GGGTCCACTC CGCGGAATGT AACCGGCATC
TCCTCGGGAA ACCATATCAT CCGGCTGACC CTGAGCGGTT ACTATGACTA CGAGGGAACC
GTGTATGTCA TTCCCGATCA GGTAACCGAT GTTTTCGGGA CGCTCCCGCC ATTAAGTGCT
TCAGTGTCAT CCCCATCGGC AAGCCTGTCA CCGGCCGTGA CGAGTGTCCC GGCAACAACG
GTCCCGGTGC AGACAACGAC GACCTCATCC GGGGACCTGC TGAGTAATCC GACCATTCTT
GCCGCACTGA TCGGGATAGT AACCGCAGGC ATTGGTGCGT TTGCAGCAAT TTTCCCGCAT
CTTGCGAAAT CCAAAAAATG A
 
Protein sequence
MKKICVPLIV FQLVLLMVTP VFADGANGTN ITTITATPAT IVTTIPAYPV NTTATPVFAN 
ATAVPVATNT TVPTETAAVP TGNTGAPSTG NLSVASSPLG ADILIDGVLY GSTPRNVTGI
SSGNHIIRLT LSGYYDYEGT VYVIPDQVTD VFGTLPPLSA SVSSPSASLS PAVTSVPATT
VPVQTTTTSS GDLLSNPTIL AALIGIVTAG IGAFAAIFPH LAKSKK