| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0313 |
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| Symbol | |
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| ID | 5410848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 301688 |
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| End bp | 302893 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640867529 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001403478 |
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| Protein GI | 154149860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCCCG CAGCCTGCTG GGGTCATTGG TCCTATGTTA TGCACCCGGA TACGATACTA
ACCAGAAGAT GCGGAAAAAT AATCCGTGGC ATTTTTATTG TCGTTCTCAT CACTTCTCTT
CTTTTCTTCT CCCCGGCGGT TGCCGGAGAT CCAAAACTCA CGATCGTCCT GACCGCACGA
ATTGTTCCTG TCTCATCAGC CTGGTTTGCC ACAAACGTCA CGGAGGGACC TGCACTGCTT
CCGGTAGCAT TTACCGACCA GTCCACAGAC ATGCCGGTAT CCTGGAAATG GGACTTCGGG
GACGGGGCTG TGGATACCGT CCGGAACCCG GTGCACATCT TCGAGACCCC GGGCATATAC
ACGGTTCTGC TGACCGTTGG TACAATGTCC GGCAATTCGT CACGAGCAGC ACAAATTATC
GATGTGGGTG CGCCGCCGGA TGCGCTGGGA TCCAATACCC TCAGGACATC AGCGATCGGC
CCGGGAACAA CAACGACTCT TGACTTTTCA GCGCAGGCCG GGACGAGTAT CGATATAACG
ACAAACAACA GCGTACAGGC CGGTACACCG GTCACCGTGA CCGAATATTC CAGCCCGCCG
TTTCCAGAAA TGTCACTTCC GGCATTTACT GCTGCAGGCA GGTACATTGC AATCTCCGCA
CAGGGGCTGG AAGCAAATGT CAGCTCGGTA ACCATAACGA TGCAGGAACC GGCCCCCCTC
CCGGCAGGTG TCACCGAGGC AAACCTTGTA ATCGAATTCT TCGACCCTGC AACCGACACC
TGGACCGTTC TTCCCTGTAC CCTCGATACC ACCAGCCACA CGATATCGAC CACATCCACG
CATCTGAGCG CCTACGGGCT GTTTGCATCA CCAGTGACTG CAGCACCCGG GAGTGGCAGC
TCTTCTGGCG CAAGTGAAGG GGGCTTTCTC TCCGGAGGGA GTTCCTCCGG CGGCAGTGGC
AGTGTAGGTC TCCTGCAATT TTTCCAGCTG GCGCCTGTCC GGGCTCCTCT GACACCGGCA
GGAATTCATG TGAACACTCC GGCAGTAGTA CCTGTATCTG CCCAGAAGGC ACCGGTCCAG
ACTCCTGCAG CGGGAACATC GGCACAGACT TCACCCGGGC TTCCCCTCAT GGGAATAGCA
GTTGTCGTGG CAGTACTTGC CATAACCGGT GTTGCACTGC TGGCATTTGC CCGGAGGAAC
ACATAA
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| Protein sequence | MDPAACWGHW SYVMHPDTIL TRRCGKIIRG IFIVVLITSL LFFSPAVAGD PKLTIVLTAR
IVPVSSAWFA TNVTEGPALL PVAFTDQSTD MPVSWKWDFG DGAVDTVRNP VHIFETPGIY
TVLLTVGTMS GNSSRAAQII DVGAPPDALG SNTLRTSAIG PGTTTTLDFS AQAGTSIDIT
TNNSVQAGTP VTVTEYSSPP FPEMSLPAFT AAGRYIAISA QGLEANVSSV TITMQEPAPL
PAGVTEANLV IEFFDPATDT WTVLPCTLDT TSHTISTTST HLSAYGLFAS PVTAAPGSGS
SSGASEGGFL SGGSSSGGSG SVGLLQFFQL APVRAPLTPA GIHVNTPAVV PVSAQKAPVQ
TPAAGTSAQT SPGLPLMGIA VVVAVLAITG VALLAFARRN T
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