Gene Mboo_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0298 
Symbol 
ID5411655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp286490 
End bp287641 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content60% 
IMG OID640867514 
Productaminotransferase, class V 
Protein accessionYP_001403463 
Protein GI154149845 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAC CCCTCATATA TCTCAACAAT GCGGCCACGA GCTGGCCAAA GCCGCCTGGT 
GTGATCGCCG CGGTCAATGA CGCACTTGCC CTGCCGTTTG GTGAGGCCGG CCGGTCTGCA
GCGGGTCTCT CATCAGATTG CGTGGCCGAT GCACGCGAAG CGGTGGCCCG GTATTTCCAT
GCACCCGAAA CAGATCACGT GATCTTCTCC GCAAACGCTA CCGACGCTCT CAATACGCTC
ATTTCGGGTT TTGCAATAAA TGAGGCCGGT CCGTTCCACG CGATCATTTC CGATCTCGAG
CACAATTCCG TGATCCGCCC CTTGCGCACG CTGGAAGCCG GGGGCCGGTG CAGTGTTACG
GTAGTCCCTT CCACGGGAGC CCGGGTTGAC CCGGATGCTG TGGCTGCAGC GCTCCGGCCC
GACACCCGCC TCGCCGTCCT TTCCCACGGG TCCAATGTCC TTGGCTCGGT ACAGGATATC
TCCGCTATCG GGAAACTTCT GCAGGACGAG AGTGTCTTCT TTATTGCTGA CGGGGCCCAG
ACCGCGGGCC TTGCACAAAT CGATCTCGGG CGGCTGCCGC TCGACGCCTT TGTTTTCACG
GGCCACAAGT ACCTTTTCGG TTTTCCGGGC ACTGGCGGGT TCTACATCCG TGACCCGGAA
AAATCTGCTT CAACCCGACA GGGTGGGACC GGAACGGATT CGCGGTATCC TCTCCAGCCG
CAGGGGATGC CGGAGAAGTT TGAGGCCGGC ACGCACAACT ACCCGGGCCT TGTCTCACTT
GCCGCCGGGA TCGCATTTCT GGAGGAGACC GGGGCTGATG CGATCGCCCG GAGCATCACA
AGGCAGGCCG GAATTTTCCT GCGGGAATTT TCCGGGACTG ATACAATCCA GGTGTACAAC
ACAAATCCTG ATCTCCCGGT GATCTCTTTT AATCTGCGGG ATCTCGAAAA TGAGGATACC
GGTTTTGTCC TCCGGCGCAT GTACGGGATC GTCACCCGGA CCGGCCTGCA CTGTGCACCG
CTCATCCACG ACAGGATCGA TGGGGGCCAT GGCTGCGTCC GGATCAGCCC ATCCATTTTG
ACTCCTGATG AAACGTGTAG GAGCGCTGCA GCAGCCATTC GCGAGGTGGC AGACAGTGTC
CATAGTGCGT GA
 
Protein sequence
MEPPLIYLNN AATSWPKPPG VIAAVNDALA LPFGEAGRSA AGLSSDCVAD AREAVARYFH 
APETDHVIFS ANATDALNTL ISGFAINEAG PFHAIISDLE HNSVIRPLRT LEAGGRCSVT
VVPSTGARVD PDAVAAALRP DTRLAVLSHG SNVLGSVQDI SAIGKLLQDE SVFFIADGAQ
TAGLAQIDLG RLPLDAFVFT GHKYLFGFPG TGGFYIRDPE KSASTRQGGT GTDSRYPLQP
QGMPEKFEAG THNYPGLVSL AAGIAFLEET GADAIARSIT RQAGIFLREF SGTDTIQVYN
TNPDLPVISF NLRDLENEDT GFVLRRMYGI VTRTGLHCAP LIHDRIDGGH GCVRISPSIL
TPDETCRSAA AAIREVADSV HSA