| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0295 |
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| Symbol | |
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| ID | 5411652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 282778 |
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| End bp | 284745 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640867511 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001403460 |
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| Protein GI | 154149842 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCA TGAAGCCGAC TGACGAACTC AGGGAACTCA TTGGCCCGGT ATTGGCGCAT
GTTGAAACTC GCGATGCAGA GCGTATAGAA AAGATCCTCC GCCGCATAGA AAAGCACGCC
GAGCTCCAGG AGAGAAAGCT TCAGCGGGCT ATCCTTGACC GTCAGGCTGT CCATTCCTTA
ATGAACCGGA CCGCAGGTGA TCTTGCAAAG CGGTACCAGA CCCTCTTTGA ACAGGATAGC
AATCCGAAAG TGATTATAGA AAAAGACGGG ACAATATCGC TTGCAAACAA TAGTTTCTGC
CTCCTCATCC ATGAAATGCG AGGAGATGTT GAGAGTAAAA AGAACATCTG CGATTACCTC
GACGGAATGA TCTGCGATCC CCTGAGTGAT GACGCCGCTC CCCGGGACGA TCTCTCGCCC
CCGGACCTCT CCTCCGGCCA GATCCACACT GCCGGTGGTG AATTTATCGA TGTTCTCATA
AACAAGGGCA GTTTCCCCGG GAGCACCCAG AGTATTGTTA CCCTTATAAA CGTCAGCGAA
CGAATGCGGC TGGAGCGGGA GCTCCTGGAA ACTTCCGGGT TCCTCTCTGG GATCCTTCAG
GCATCCCCGG TTGGGTTCCA CATGACGGAC ACTAAGGGAA ATTACGTGTA CGTGAACGAG
ACCTGGTCAG CCATTACCGG GTTTGCCCCG GACCAGGTGC AGGGAAAGTA TTATTCCCTT
ATCCTTCACC CTGATGACTG CGACCGCATC GCCGATGAGA TCGAGGAAAT TGCCAAAAGA
AGAGTATCCC GCGAGATCGA GACCAGGATT ATCAGGCCCG ATGGCACCGT CCGCTGGATT
TTCAATCATT CCGTACCTGT TATCGATGAT GGGGGGCAGC TGACCGGCTG GGTGGGAGCG
GTCAGTGATA TCACGGAGCG AAAAAAGATT GAAACAGCCT TAAAAGAGAG CGAGGAAAAA
TACCGGGCCC TCACGGAAAA CACAGGGGAC GTCCTCTATT CCGTGGATAT GGACGGGAAT
ATTACCTATG TTTCCCCGCA GGTCAGCAGG TACGGGTACA CGCAGGAAGA GGTGATCAGC
ATGCCGCTTT CCGCATTCAT CCATCCGCTG GACATTTCCC GTGTGAGAAA GTCTCTTGCC
TCTCAAGCAC AGGACCGGGT CCACACCATT TCCACGTTCC GGATCTTTTC CCGTAACGGA
AATATCCACT GGCTGGAAGG CAAAAGTACC CTGCAGACCG ATGCATCAGG AAAACCCCTG
AGTTTTTTGG GGATTCTCCG GGATGTGACG GATCGGAAAC ACGCAGAAGA TGCGATCGCG
CTTGCAAACC GCAAGCTCAA CCTGATGAAC AATGTCACCC GGCACGATAT CCTCAACACG
ATCACCGGTG TGTACGGTTT TATCGATATG GCAAACGCCA CCTCATGTGA GGAGGAGCGG
GTACAGCTGC TCCACGATGT CAAGGATCTC GTAGGCATTA TCCAGCGCCA AATCAACTTC
ACCAAGCAGT ACCAGGAAGT CGGGATCCAA GAGCCCCAGT GGCAGCGGGT GGCAGCGGTT
ATCGAGCGTG TGATCCCGAA TTTTTCCCGG TCCGGGCTTG AGTTTGCCGT CGAACTGGAC
CGGCTTGAGA TCTATGCAGA CCCCCTGCTT GAAAAAGTGT TTTACAATCT GATCGACAAT
GCCATTCGGT ACGGGGACAC GCTCACCACC ATTTCCGCCC GTTTCGATCT TTCCCCCGCC
GGCCTTTCCC TTATTATCGA AGACAATGGC GTGGGCATTT CCTCTGAGGA GAAGGAGCAG
ATCTTTGAGC GGGGGATCGG GAAAAATACC GGCCTTGGCC TTTTTATGAC CCGTGAGATT
CTCGGTATTA CAGGCATCAC AATTACCGAG AACGGTGAAC CCGGCAAAGG AGCAATGTTT
GTGCTTTCTG TGCCCCGGGG AGCATACCGC CTTGCGGATA AAGATTGA
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| Protein sequence | MTLMKPTDEL RELIGPVLAH VETRDAERIE KILRRIEKHA ELQERKLQRA ILDRQAVHSL
MNRTAGDLAK RYQTLFEQDS NPKVIIEKDG TISLANNSFC LLIHEMRGDV ESKKNICDYL
DGMICDPLSD DAAPRDDLSP PDLSSGQIHT AGGEFIDVLI NKGSFPGSTQ SIVTLINVSE
RMRLERELLE TSGFLSGILQ ASPVGFHMTD TKGNYVYVNE TWSAITGFAP DQVQGKYYSL
ILHPDDCDRI ADEIEEIAKR RVSREIETRI IRPDGTVRWI FNHSVPVIDD GGQLTGWVGA
VSDITERKKI ETALKESEEK YRALTENTGD VLYSVDMDGN ITYVSPQVSR YGYTQEEVIS
MPLSAFIHPL DISRVRKSLA SQAQDRVHTI STFRIFSRNG NIHWLEGKST LQTDASGKPL
SFLGILRDVT DRKHAEDAIA LANRKLNLMN NVTRHDILNT ITGVYGFIDM ANATSCEEER
VQLLHDVKDL VGIIQRQINF TKQYQEVGIQ EPQWQRVAAV IERVIPNFSR SGLEFAVELD
RLEIYADPLL EKVFYNLIDN AIRYGDTLTT ISARFDLSPA GLSLIIEDNG VGISSEEKEQ
IFERGIGKNT GLGLFMTREI LGITGITITE NGEPGKGAMF VLSVPRGAYR LADKD
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