Gene Mboo_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0279 
Symbol 
ID5410301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp263350 
End bp264435 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content62% 
IMG OID640867495 
Producthypothetical protein 
Protein accessionYP_001403444 
Protein GI154149826 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA TGCAGGCTGA AAGCAGGATA GGGGAGATCT GGCAGCAGAG GATGGCTGCA 
TTGCGGGAGT ACAGCGTGGT CCGCGACGGG AACGTCTTTG GAGCGGGACT TGCCGGTTCC
TGCCTGTTCT CTTCCGAATA CGACCGGGCC CGGGCCCTTT TGGGGAGACT GGTATCACAG
TACGACAATG TCTCGTTTGA ATCCCTGTTT CCCGGTAGCG AGATCGAAAC AGAAAACGGG
ACCTGCCTTG CCCTCGAACA CCGCGAGGCA TTTGCTGCCC CTCCCCTTGA CGGGGAGCGT
CTTAGTGCGG AGATGCTTGC CGACCTCACG CTGGTCCGGG GGATCGGGGA GCGCTCTGCA
GCCCGGCTCA GGGCCCGGGG CTGGAAAACG ATAGCCGACC TCGCAAACCA CCCCCGGTTC
CGGTACGCGG CACGTGAGGT GCTCGAACGC CTTAGCCGTG CCGATCCCCG TGAGATCATG
GACCTTGCCG GCAACCGGCA TGCAAAGTCC CACCCGTTCG TGCTCGGGGC GGCCGGTGCG
TTTTCACCTC AAGATTTCGT ATTCCTCGAT ATCGAGACGC TCGGCCTCTT CTCCCGGCCC
ATCATCCTCT TTGGGGTCGG GACCGTTGAA GAAAGGAACT TCGTTGTCCG CCAGTACCTG
CTCCGCGACA TCGGCGAGGA GGCAGCCGCA CTCACGGCAC TGGCAGGCCA TTTTGCCAGA
CAGAAAAAAG CGCTTGTCAC CTTCAACGGC AAAGCGTTCG ACCTCCCGTA CGTGCAGGAC
CGGCTTGCAT ACTATGGCAT CCCCCCGGTT TCCCGGGTCC CGCACTTCGA TGTCCTGCAC
TTTGCCCGGC GCCGGTGGAA GGGGCAGTAT CCCTCCTGCC GTCTCGGGGA ACTCGAATCC
GCAATTCTCG GTGTCGGGCG GGAAAACGAT GTGCCGGGCC AGATGGTCCC CGAGTTCTAC
GAGACTTACC TGCGGACAAA TAACTGCGGC CCGCTCGTCC CCATCGTCCA CCACAACCGG
CAGGACGTGA TATCAACGGC GCACCTCTTC TTTTACCTGC TGGGGGAGAC CTGTGGCCGT
TGCTGA
 
Protein sequence
MAGMQAESRI GEIWQQRMAA LREYSVVRDG NVFGAGLAGS CLFSSEYDRA RALLGRLVSQ 
YDNVSFESLF PGSEIETENG TCLALEHREA FAAPPLDGER LSAEMLADLT LVRGIGERSA
ARLRARGWKT IADLANHPRF RYAAREVLER LSRADPREIM DLAGNRHAKS HPFVLGAAGA
FSPQDFVFLD IETLGLFSRP IILFGVGTVE ERNFVVRQYL LRDIGEEAAA LTALAGHFAR
QKKALVTFNG KAFDLPYVQD RLAYYGIPPV SRVPHFDVLH FARRRWKGQY PSCRLGELES
AILGVGREND VPGQMVPEFY ETYLRTNNCG PLVPIVHHNR QDVISTAHLF FYLLGETCGR
C