Gene Mboo_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0275 
Symbol 
ID5412228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp259268 
End bp260233 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID640867491 
Productphosphoribulokinase/uridine kinase 
Protein accessionYP_001403440 
Protein GI154149822 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0719547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTA CTCCCCCGTT CAAGGAGATC ATCGCCCGCT CTCCACTTGT CTTTGTCATC 
GGCGTTGCAG GTGACAGCGG ATCGGGAAAA ACCACATTCA CCAACGCCAT CCGCGAGATC
TTCGGCCCTG ACCTTGTTGC CACCATCACG CTGGATGACT ATCACACGTA TGACCGGGAG
GAGCGCCACC ACCTCGATAT TACCCCGCTC CATCCCGATG CAAATAATCT CTCAGGGCTT
GAAGCAGACG TGGCACACCT TAAACAAGGC TACGCGATTG AAAAACCGGT ATACAATCAT
GCAACAGGCA CATTCGATCC ACCCATCCCG TTTCCTTCAA AAAAGATCCT GATCCTTGAA
GGCCTCCACA CCCTCTTTAC GCCGGCTCTC CGGGATCTTG TGGATTTCTC CGTCTTTGTC
GATCCGGACC GGGAGGTCAA GTATGCATGG AAACGGCAGC GCGATACCGG GCAGCGGGGG
TATTCCCCGG ACGAGGTCAA CGGGGAGATT GCCCGGCGCG AAGCAGATTA TGCGACATAT
ATCGAACCTC AGCGCTGCAA TGCCGATGCA ATTATTCGGA TCGGGTACTC GAAGTACGGG
AAGGATCTCG GGCCTGCAAA AAATGTATAC TCCATCTCCC TGCTCCAGAA CCCGATGGAC
CAGGCAGTCC GCAATACATC CCTCTCTATC GATCTCACCT CCCTGCTTGC CTTCCATGAA
AGTGAGTTCT CTATTGAATT TTCAACGCAG AGGATCGAAT GTTCTTTTTT GCGCTCACTC
ACCTTTGACG GGGAGATGAA TTACGATACG GTCCGTAATC TGGAACTCTC AATCGAGCAC
CAGACCGGAA TCCACCCTAT AGAGATGTTT GCCGGGCGAA AGGTTGTGAC CCCGACCAAT
ATTGTCCAGC TGCTCCTCTC GTGGCGGATC ATCAACCGGC GGATTTTCCT GCAGGACCAC
AGATAA
 
Protein sequence
MPRTPPFKEI IARSPLVFVI GVAGDSGSGK TTFTNAIREI FGPDLVATIT LDDYHTYDRE 
ERHHLDITPL HPDANNLSGL EADVAHLKQG YAIEKPVYNH ATGTFDPPIP FPSKKILILE
GLHTLFTPAL RDLVDFSVFV DPDREVKYAW KRQRDTGQRG YSPDEVNGEI ARREADYATY
IEPQRCNADA IIRIGYSKYG KDLGPAKNVY SISLLQNPMD QAVRNTSLSI DLTSLLAFHE
SEFSIEFSTQ RIECSFLRSL TFDGEMNYDT VRNLELSIEH QTGIHPIEMF AGRKVVTPTN
IVQLLLSWRI INRRIFLQDH R