| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0274 |
|---|
| Symbol | |
|---|
| ID | 5412227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 257733 |
|---|
| End bp | 259151 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640867490 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001403439 |
|---|
| Protein GI | 154149821 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.836728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCG TTCTGTACGT TGAGCCGGAT GCCCGTATGC AGGAAGAGGT CCGCGGGTTC
CTTGAGTCTG ACCCCGGGAT CCGGGTAGTG ACGCTCGGAT CTGCGTACGA AGCCCTGGAT
CTTATCCGGG AACGCCGGTT CGATGTCATT GTGTCCGAGT CCTGCCTGCC GGTGACGGAT
GGGCAGGCTT TCCTTGAGGT CTTACGGTTG GGGCGTAAGG AATCAACCCC CTTTATTATT
TTTGCAAAAA AATCCAGCCA TAATGACGCC ATCCGGGCGC TCAACACCGG TGCAACCTAT
TACCTTCTCA AAGGGACGGA TCCGGAAAAA GTGTTTCCGG TACTCAGGCA TTATGTCACG
CAGGCCGTAA ATCAGCACCG GATCAAGGAG GAACTTGAAA AAAGCGAGAA GCGGTATCGG
AGCGTTGTGG AGGACCAGTC TGAATTTATT GTCCGGTTCC GGCCTGACGG CAGACTGGTC
TTTGCAAACG GGGCTTATTG CCGTTACGTC TCCCTGAATG AGAAAGAATT AATCTTTGGG
AAAACGGTCG ATCTGCCGCC ATTCGGCCAG AAGGACCTCT TTTTACAGGA CCTCCGCGCA
CTTTCCCCGG ATGCCCCGAC CAGTACCCTG GAACTGCCGT GGATCCTTCC CGATGGCAGG
GTGGCATGGC AGAACTGGGA AAACCGGGCG ATCTTTGATG CCGAAGGAAA GATCATCGAA
TACCAGTCCG TAGGAAGGGA CATCACAGAG CGGAAGACTG CGGAATTTGC ACTCCGTGAA
GCCCTCAGGA ACCTTGGGAT AATGAACTCG ATCACCCGCC ATGACATCCT CAACCAGCTC
ACCGGGATGT TCGGGTACCT GGAGTCCTGC CTCAATGCCA GTACAGATCC CCGGGTCCGC
GAATCCCTGG GTAAGGCGAT CTCGACCGCA GAGACTATGA AGACCCAGAT CCTCTTTACC
CGGGACTACC AGGAGATCGG GAACGCTGCG CCCCGTTGGC AGAATGCGGA GGAGATCTTC
TCCCGGGCTG CAGGCAGCCT CGCCCTTTCC CGTATGACGC TCGAAATTCA CCTCGATAAT
CTCTGGGTCT ATGCGGATCC CTTAATAGAG AAGGTCTTTT TCAACCTCCT GGAAAACTCC
TTGCGTCATG GGGAAAGGGT CTCCGTTATC CGGGTATTCT CACGTGAGGA TGACCACGGC
CTTATGGTTG TGTACGAGGA TAACGGCATA GGTGTCCCGG CCGGTGCAAA AGAGAAGATC
TTCCGGCGAG AGTACTTCCA GAATACCGGT CTTGGCCTGT ACCTGAGCCG GGAGATCCTG
GCGATTACCA AGATGGAGAT CCAGGAGACC GGCATCCCGG GTGAGGGTGC CCGGTTTGAG
ATCTTTGTCC CGAAAGGATC ATACGGGACT CGGGTCTAG
|
|---|
| Protein sequence | MISVLYVEPD ARMQEEVRGF LESDPGIRVV TLGSAYEALD LIRERRFDVI VSESCLPVTD
GQAFLEVLRL GRKESTPFII FAKKSSHNDA IRALNTGATY YLLKGTDPEK VFPVLRHYVT
QAVNQHRIKE ELEKSEKRYR SVVEDQSEFI VRFRPDGRLV FANGAYCRYV SLNEKELIFG
KTVDLPPFGQ KDLFLQDLRA LSPDAPTSTL ELPWILPDGR VAWQNWENRA IFDAEGKIIE
YQSVGRDITE RKTAEFALRE ALRNLGIMNS ITRHDILNQL TGMFGYLESC LNASTDPRVR
ESLGKAISTA ETMKTQILFT RDYQEIGNAA PRWQNAEEIF SRAAGSLALS RMTLEIHLDN
LWVYADPLIE KVFFNLLENS LRHGERVSVI RVFSREDDHG LMVVYEDNGI GVPAGAKEKI
FRREYFQNTG LGLYLSREIL AITKMEIQET GIPGEGARFE IFVPKGSYGT RV
|
|---|
| |