Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0272 |
Symbol | |
ID | 5412225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 255132 |
End bp | 256043 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867488 |
Product | tRNA-modifying enzyme |
Protein accession | YP_001403437 |
Protein GI | 154149819 |
COG category | [C] Energy production and conversion |
COG ID | [COG0731] Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.749117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCA CACCATGTGA CGCCCGGATA CGGCAAGGGT ATCTTTTTTT TTCACCAAAG TCGTCCGCTG CACTCAAGCC CTGCCTCTGG TGCAAGCGGG CGCTTACCGG CGGGGATATG TGCTACAAGC ACCAGTTCTA CGGAATTGAC AGCCACCGCT GCGTCCAGAT GACGCCCACC CTCCGCTGCA ACCAGCGCTG CCTCTTCTGC TGGCGTTCGT TTGAGCACGA AGTGGAAGAG GAGGAAGAGT GCCCTCCGGA AACGATCCTC GCAGGAGTGC CCAAGCTCCA GAAAAAGGCT CTCGCCGGCT ACAATTCTGT ACTCGGCAAC ACCGTGACGG ATGAGCGCTG GCAGGAGGCG CTCAAACCCC GGCATGTTGC GATCTCCCTT TCGGGCGAGC CCACGCTCTA CAGCCGGCTC CCGGAACTGG TCGACCTCTT CAACGCGAAC GGGTACACGA CGTTTGTGGT CAGCAACGGC ACAAACCCGG ATATGATTGC TCGGTGCCGG CCGTTTCAAC AGTATATTTC GCTCGATGCG CCGGACTGTG AAACCTACGA GAGGGCCTGC CGGCCCATGG GTAATGCCGA AGCGTTCTGG GATCGGATCC GGGAGAGCCT TGGCAAGCTC CGGGCAAAAA GATCTGCGGT ACGGATAACG CTTGTTGCCG GCGTCAACGA TACGGACCCG GAAGGATATG CCCGGATCAT ACAGGACTCA GGGGCCACCT ATGTCGAGGT AAAAGGATAC ATGTATCTGG GATACAGTAG AAACCGTTTG CAACGGAATA ACATGCCGGA ACATGCACAG GTGCGGGACT TTGCAGAGAG GGTCTCCGCA TCGTGCGATT ATACCATCCG GGATGAAAAC CCCTTAAGCA GGGTCGTCTG CATGGAGCGC GAGGAACAAT GA
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Protein sequence | MPSTPCDARI RQGYLFFSPK SSAALKPCLW CKRALTGGDM CYKHQFYGID SHRCVQMTPT LRCNQRCLFC WRSFEHEVEE EEECPPETIL AGVPKLQKKA LAGYNSVLGN TVTDERWQEA LKPRHVAISL SGEPTLYSRL PELVDLFNAN GYTTFVVSNG TNPDMIARCR PFQQYISLDA PDCETYERAC RPMGNAEAFW DRIRESLGKL RAKRSAVRIT LVAGVNDTDP EGYARIIQDS GATYVEVKGY MYLGYSRNRL QRNNMPEHAQ VRDFAERVSA SCDYTIRDEN PLSRVVCMER EEQ
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