Gene Mboo_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0268 
Symbol 
ID5412221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp250767 
End bp251264 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID640867484 
ProductNUDIX hydrolase 
Protein accessionYP_001403433 
Protein GI154149815 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.880251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCT TTCGGGGCGG AAAACTCTGG ATAGAGAAGA AGAAAATTCA GTTACCAAAC 
GGTGTGGAAA AGGACGCGGT GATCGTGCAC CCGAAGGGTG CAGTTGCGAT CCTGCCGGTG
ACAGAGACCG GGTACCTGCT CTTGCGCCAG TACCGGTATG CGGTCGGGCA GTATATTTGG
GAGGCGCCCG CCGGGACAAT GGAGGATGGC GAGGACCCGA TAGAGACCGC CCGGCGCGAG
CTTATCGAGG AGGCGGGAGT GGCAGCAGGA AATCTCATTC CCCGCGGTTT CATTTACACC
ACGCCCGGAT TCACAGATGA AAAGATCTGG CTCTTTGAGG CCCGGGATCT TACCCCGTCT
GATGAATTCC AGAAAGACGC GGACGAAGTG ATTGAAGTTA TGGATGTCAC CAGGGATAAC
ACAGACGCGA TGGTTACCGA TGGCACCATC TGCGATGCAA AGACGATCTG CCTGCTCCAC
CAGTGCGGGG AGGGATAG
 
Protein sequence
MEIFRGGKLW IEKKKIQLPN GVEKDAVIVH PKGAVAILPV TETGYLLLRQ YRYAVGQYIW 
EAPAGTMEDG EDPIETARRE LIEEAGVAAG NLIPRGFIYT TPGFTDEKIW LFEARDLTPS
DEFQKDADEV IEVMDVTRDN TDAMVTDGTI CDAKTICLLH QCGEG