Gene Mboo_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0246 
Symbol 
ID5410963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp227617 
End bp227967 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID640867462 
Productnucleotide binding protein, PINc 
Protein accessionYP_001403411 
Protein GI154149793 
COG category[R] General function prediction only 
COG ID[COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGG CGCAGTTCAG GATAGATCTC TTTAACGAGA TCCGGGAGCT GCTGGGCAAT 
TTCGAGCCGG TGGTGCTGCA GGGCGTGCTT CAGGAACTGG GCGGATTGTC CCGGGCAAAA
GGCAATGAAG GGGCCGCAGC ACGCTTCGGC CTGACGCTCG CCAGGCAGTG CACGGTTGCA
GAAGGCAGCA GTTCACCCCA ACCCGTTGAC GACCAGGTGA TTGCCTGGGC ACGGGAAAAC
CGCGGCATGG TTGTGACCAA CGACCGCCGG GTGAGGGATG CGCTGCTCGC AGATGGGCTC
GGGGTAATAT CCATGAGAAA GCAGAAGAAA CTCGAAATAG TGCGAAAGTA G
 
Protein sequence
MMPAQFRIDL FNEIRELLGN FEPVVLQGVL QELGGLSRAK GNEGAAARFG LTLARQCTVA 
EGSSSPQPVD DQVIAWAREN RGMVVTNDRR VRDALLADGL GVISMRKQKK LEIVRK