Gene Mboo_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0233 
Symbol 
ID5410476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp218393 
End bp219535 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content58% 
IMG OID640867447 
Productradical SAM domain-containing protein 
Protein accessionYP_001403398 
Protein GI154149780 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.576221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACG GAATCCTTCC CATGTATTTC CATCTCATCC TTACCGATGA CTGCAACCTC 
TGCTGCCGGT ACTGCCGGGC AAAGGCTTTC GAAGAGGAGG AAGAGCCGGA AGGCGGCAGG
ATCGAGATCG ATGAGGATCT CCCTCCGGAT CTCGATTTCG ATCTCACGCT GCTTTACCGG
TTCCTTGCAC GCGATCCCGC GGCCACCCTC ACTTTTTACG GGGGTGAGCC ACTCCTTAGG
TCGGATCTTA TCGAACGGAT CGTCCGTGAG GCACCTGTGC AGCGGTTCAT GATACAGACA
AACGGCCTCC TGCTCGACCG GCTGGCTCCG GAGATAGTCA ACCGGTTCTC CACGATCCTT
GTCTCGCTGG ATGGCCGCGA GGCCCTGACC GACGGGAACC GGGGGGACCG GGTTTTTTTG
CGGGTGATGG GAAACGTACA AAAGATCCTG CAGAACGGGT ACCGCGGGGA ACTGATCGCG
CGGATGACGG TTACCGAGCG CACCAATATT TTCGATCAGG TCCGGTACCT CGCGGATAAC
CCGTACCACA GTTTCTCATC CATTCACTGG CAGATGGATG CAAACTTTAC CGGGGATTTC
GGGCACCGGG CATTTGCACA ATGGGCGGAC ACGAATTACA ACCCTGGAAT CCGGGCGCTC
GTTACTGCCT GGGCTGACGA GATGGAGAAG AGCGGCAGGG TCATGCGCTG GTATCCCCTC
ATCGATCCGA TGGAAGATCT CCTGTACGGG AAAGAGAGCC TCCTGCGGTG CGGGGCCGGC
CATGCCAACT ATACCATCCT GACCGACGGC CATATCTCCC CCTGCCCGAT CATGATCGGG
ATGAAACAGT ACTATGTCGG CCATATCCGG GATGCAGACC CCAAAAATCT CCCAAAGGTC
CCGGTCGGGG GAGAATGCCA GACCTGCCGG ATAAGGACAT TCTGTGGCGG ACGGTGCCTC
TACTCTGCTA TCGTTCAACC CTGGAAACCT GCCGGCCGGG AGCTGGTGTG CGGGACTGTA
CAAAACCTGT ACGATGCCCT TGCCGGGGCA CTGCCGCGTG TGCAGGATCT GATACGATCC
GGCCGGATCA GCCCCGGTGA ATTCTCCCAC GAGAAGTTCA ACGGGTGCGA GATCATTCCC
TAA
 
Protein sequence
MINGILPMYF HLILTDDCNL CCRYCRAKAF EEEEEPEGGR IEIDEDLPPD LDFDLTLLYR 
FLARDPAATL TFYGGEPLLR SDLIERIVRE APVQRFMIQT NGLLLDRLAP EIVNRFSTIL
VSLDGREALT DGNRGDRVFL RVMGNVQKIL QNGYRGELIA RMTVTERTNI FDQVRYLADN
PYHSFSSIHW QMDANFTGDF GHRAFAQWAD TNYNPGIRAL VTAWADEMEK SGRVMRWYPL
IDPMEDLLYG KESLLRCGAG HANYTILTDG HISPCPIMIG MKQYYVGHIR DADPKNLPKV
PVGGECQTCR IRTFCGGRCL YSAIVQPWKP AGRELVCGTV QNLYDALAGA LPRVQDLIRS
GRISPGEFSH EKFNGCEIIP