Gene Mboo_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0222 
SymboltrpA 
ID5411822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp210032 
End bp210829 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID640867436 
Producttryptophan synthase subunit alpha 
Protein accessionYP_001403387 
Protein GI154149769 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0159] Tryptophan synthase alpha chain 
TIGRFAM ID[TIGR00262] tryptophan synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGAC GTATTGAATC CGTCTTTGCC AAAAAAGGGA AGTCCGCGTT CATCGGCTTT 
ACCGTTGCCG GCGACCCGGA CAAAGAGACA TCAATCAGAA TCGCAAAGGC GCTGATCGAT
GGCGGCACAG ATATCCTCGA ATTCGGCGTG CCGTTTTCGG ATCCGGTGGC AGACGGGCCG
ACAATCCAGC GGGCAGACGA CCGGGCGCTT GCATCCTGCA CCACACCCGA TACGATCTTT
GCAATCGTCC GGGAAGTCCG GGCGTACTCC GAAGTCCCGA TCGTCTTTCT GACATACTAC
AACACGATCT ATCGCAGGGG CATCGACCGG TTCTACCTCG AAGCGCACGA GGCAGGCGTA
GACGGGATCC TTGTTGCTGA CATGCCGGTG GAGGAATCGG ATGAGGTCGC TGCAACCGCG
GAGAAGTACG GGATCGACCC TATCTTCCTT GTCACCCAGA CCACCTCCAA TGAACGCATG
GACACCATCG TACGCCATGC CCGCGGGTAT CTGTACCTCG TCTCGGTGCT CGGTGTCACA
GGTGCACGTA AGACCGTAGC TCCGGAAGCT CTCGCTCTCT TGAACCGGGT CCGCTCGCAC
ACCGATCTTC CACTCGCCAT CGGATTTGGG ATCTCCACGC CCGAACATGT AACCACCTGC
AACCTGGCCG GGGCCGATGG CGTGATTGTC GGGAGCGCGA TTGTGGATAT CGTGGAAAAA
AACCTAGGCA ATCCGGACGC GATGGAACAA GATCTTCGTC GCTACGTCTC CGTGATGAAA
AAAGCAGCAG AGCAGTGA
 
Protein sequence
MMGRIESVFA KKGKSAFIGF TVAGDPDKET SIRIAKALID GGTDILEFGV PFSDPVADGP 
TIQRADDRAL ASCTTPDTIF AIVREVRAYS EVPIVFLTYY NTIYRRGIDR FYLEAHEAGV
DGILVADMPV EESDEVAATA EKYGIDPIFL VTQTTSNERM DTIVRHARGY LYLVSVLGVT
GARKTVAPEA LALLNRVRSH TDLPLAIGFG ISTPEHVTTC NLAGADGVIV GSAIVDIVEK
NLGNPDAMEQ DLRRYVSVMK KAAEQ