Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0222 |
Symbol | trpA |
ID | 5411822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 210032 |
End bp | 210829 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867436 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001403387 |
Protein GI | 154149769 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGAC GTATTGAATC CGTCTTTGCC AAAAAAGGGA AGTCCGCGTT CATCGGCTTT ACCGTTGCCG GCGACCCGGA CAAAGAGACA TCAATCAGAA TCGCAAAGGC GCTGATCGAT GGCGGCACAG ATATCCTCGA ATTCGGCGTG CCGTTTTCGG ATCCGGTGGC AGACGGGCCG ACAATCCAGC GGGCAGACGA CCGGGCGCTT GCATCCTGCA CCACACCCGA TACGATCTTT GCAATCGTCC GGGAAGTCCG GGCGTACTCC GAAGTCCCGA TCGTCTTTCT GACATACTAC AACACGATCT ATCGCAGGGG CATCGACCGG TTCTACCTCG AAGCGCACGA GGCAGGCGTA GACGGGATCC TTGTTGCTGA CATGCCGGTG GAGGAATCGG ATGAGGTCGC TGCAACCGCG GAGAAGTACG GGATCGACCC TATCTTCCTT GTCACCCAGA CCACCTCCAA TGAACGCATG GACACCATCG TACGCCATGC CCGCGGGTAT CTGTACCTCG TCTCGGTGCT CGGTGTCACA GGTGCACGTA AGACCGTAGC TCCGGAAGCT CTCGCTCTCT TGAACCGGGT CCGCTCGCAC ACCGATCTTC CACTCGCCAT CGGATTTGGG ATCTCCACGC CCGAACATGT AACCACCTGC AACCTGGCCG GGGCCGATGG CGTGATTGTC GGGAGCGCGA TTGTGGATAT CGTGGAAAAA AACCTAGGCA ATCCGGACGC GATGGAACAA GATCTTCGTC GCTACGTCTC CGTGATGAAA AAAGCAGCAG AGCAGTGA
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Protein sequence | MMGRIESVFA KKGKSAFIGF TVAGDPDKET SIRIAKALID GGTDILEFGV PFSDPVADGP TIQRADDRAL ASCTTPDTIF AIVREVRAYS EVPIVFLTYY NTIYRRGIDR FYLEAHEAGV DGILVADMPV EESDEVAATA EKYGIDPIFL VTQTTSNERM DTIVRHARGY LYLVSVLGVT GARKTVAPEA LALLNRVRSH TDLPLAIGFG ISTPEHVTTC NLAGADGVIV GSAIVDIVEK NLGNPDAMEQ DLRRYVSVMK KAAEQ
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