Gene Mboo_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0218 
Symbol 
ID5411818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp207152 
End bp207583 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID640867432 
Productprotein tyrosine phosphatase 
Protein accessionYP_001403383 
Protein GI154149765 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID[TIGR02691] arsenate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC AATCCCGCGT CCTCTTTATC TGCACTGCAA ACGCGGCCCG CTCCCAGATG 
GCCGAAGGCT ACCTCCGGGC AAAGTACGGC GACCGGTTCG ACGTCTTCTC GGCCGGGGTC
CACCCGGCCG GGCAGGTAAG CCCCCGGGCG GTCCAGGCAA TGAAGGAGAT CGGCATTGAT
ATCTCAGGCC ACCGGCCAAA GTCGGTTGAC ACGTTTACCG GGGTCCCGCT CGATCTCGCA
GTCACGCTCT GCGACAATGC CGGTGCGGTC TGCCCGGTAA TCCCATCAGC AAAAAGGACG
ATCCACCACG CCTTTCCCGA TCCCCACCTG ACGGCGGGGA CGGACGAAGA TATCCTTGAC
GGGTACCGAA GGGTGAGAGA TGCAATCTGC ACGTGGATCG ATGCCACCTT CGTGCATGGC
CTGCCCATGT GA
 
Protein sequence
MAQQSRVLFI CTANAARSQM AEGYLRAKYG DRFDVFSAGV HPAGQVSPRA VQAMKEIGID 
ISGHRPKSVD TFTGVPLDLA VTLCDNAGAV CPVIPSAKRT IHHAFPDPHL TAGTDEDILD
GYRRVRDAIC TWIDATFVHG LPM