| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0206 |
|---|
| Symbol | |
|---|
| ID | 5411153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 197705 |
|---|
| End bp | 198199 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640867421 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_001403372 |
|---|
| Protein GI | 154149754 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCTA TGGCTCTCCG ATCTCTCAAC CTTCCCGGTG TTGGAACAAA GTACGAATTC
GAGACGGACA AAGGTGATAC CGTGGCGATC TTTTTTACCA AGGCCGGTAC CATCCAGATG
TACACCCTCC AGAAGGGTTG CCATACCCCA AGCGCAGCCG AAATGACCCC CGTGGAAGCA
CGGAGGCTGG GAAACATCCT GACCGGGGCC ATAATTGAGG CTGACCAGGA GAGCGTGGAG
ATCGCGTTCT CGGCGCTCGC CGATCTCCGG GTTACCATCC ATTCGTACAT CATCCCCAGA
GCCATTGCCG GGAAAACAAT CGAAGACCTT GGGATCCGGG CAAAGACCGG AACGACCGTT
ATTGCAGTCT CCCGGAACGA CAAAAATATC ATCAATCCCC CGCCATCGTT CGTGTTCGAG
ACCGGGGACG CAGTCCTTGT GATCGGCGAA TCAGACCAGC TCCGGTTGTT TGAGCGCGAG
ATCATGGTGG ATTGA
|
|---|
| Protein sequence | MSPMALRSLN LPGVGTKYEF ETDKGDTVAI FFTKAGTIQM YTLQKGCHTP SAAEMTPVEA
RRLGNILTGA IIEADQESVE IAFSALADLR VTIHSYIIPR AIAGKTIEDL GIRAKTGTTV
IAVSRNDKNI INPPPSFVFE TGDAVLVIGE SDQLRLFERE IMVD
|
|---|
| |