| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0176 |
|---|
| Symbol | |
|---|
| ID | 5411714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 172464 |
|---|
| End bp | 173303 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640867391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403342 |
|---|
| Protein GI | 154149724 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.261727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC CTCCCCCGCC TCCGCAGCAG TACCTCGCCA CCGGTTTTCG CGACGTGGAC
GGATCGACAG ATACCCCGGC CTGCACCCGC TGCCTCGATC TGATTGCCGG TATCCCATTC
TTCAGGCGCG TAAAAGACGA GAGTTTCCGG ATCCTTGCCG GTACCCGCCC CGGCCTTGTC
CTTGACGCCG GCTGCGGTGC AGGAAACGAT CTATTGGCCC TTGCCGGGCT CCTCTCCCCG
GATTCGAGGC TCATTGGCCT TGACGCGAGC GCCCGGCTCC TTGCAACCGC CGCAGAACGG
ATCGCTGATC ACCGGGCCCG GTGCTGCCTT GTCCGGGGCG ACCTCCTGTC CGTCCCGTTC
CGGAAGAGTA CGTTTGCTGC ATGCCGGATC GATCGTGTCC TCCAGCACCT CCATAACCCG
GGCCGGGTGG TACAGGAGCT CGTGCGGGTC CTTGAGCCGG GCGGGACGCT CGTTGCCTTT
GACAATGACT GGGACACGCT CACTCTCTCC CTGGACAACC GGCACGCTGC AGCCGCACTT
ACCCGGTTCT GGAGCGACAG TTTTGCATCG GGCCGGGTGG GAAAGGATCT CGCCACTCTC
TTTTCTGATG CCGGGCTCAC GGATGTCGTC GCTGAGCCGC GAGCCCTTGC GCTCACCGAC
CCTGAGATCG CGGAGAAGGT CTTTGACATC CCTGCGCTGC TTGACCGGAT GAATGCAGCG
GGACTCCTGA ACGCTGGCGA AGTGCACGAA ATAAAAGAGG ATCTCGCCCG GAACGCCCGG
CGCGGAACGT TTGCCTCCGG CTACACCGGT TACCTGGTCC GGGGCAGGAA ACCTGTTTAA
|
|---|
| Protein sequence | MTAPPPPPQQ YLATGFRDVD GSTDTPACTR CLDLIAGIPF FRRVKDESFR ILAGTRPGLV
LDAGCGAGND LLALAGLLSP DSRLIGLDAS ARLLATAAER IADHRARCCL VRGDLLSVPF
RKSTFAACRI DRVLQHLHNP GRVVQELVRV LEPGGTLVAF DNDWDTLTLS LDNRHAAAAL
TRFWSDSFAS GRVGKDLATL FSDAGLTDVV AEPRALALTD PEIAEKVFDI PALLDRMNAA
GLLNAGEVHE IKEDLARNAR RGTFASGYTG YLVRGRKPV
|
|---|
| |