Gene Mboo_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0172 
Symbol 
ID5411710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp170156 
End bp170683 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID640867387 
Productpyruvate/ketoisovalerate oxidoreductase, gamma subunit 
Protein accessionYP_001403338 
Protein GI154149720 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGG TCCGGATCCA TTCACGGGGC GGGCAGGGAG GAGTGACCGC GGCAAAACTG 
TTGGCCGGTG CCGCGCTTCA TGACGGGAAG TACGCAACCG CCTGCCCGTT CTATGGCGCC
GAGCGCCGGG GAGCACCGGT GGTCTCGTTT GTCCGGATCG ACGACCGTCC GATCAAAATT
TACAGCCAGA TCCGGGAGCC GGACCTTGTT GTTGTCCTCG ATGCGAGCGT GATGGAGACG
GTCGATGTCC TGCACGGGTT AAAGACCGGT GGCAGGGTCT TTGTCAACAG CGCCCACCCA
CGGGAATTTG CCGGTTACCG TGCGGCCCAT GCCGATCTCA CCGGTATTGC ACTCAAAGAG
AGCCTTGTAG TCGCGGGGAG CCCGATCCTC AACACCCCGG TGATTGGGGC ACTTGCAAAA
GCCGGTATCG TGTCGCCGGG CTCGGCCACA GCGGCGATAC GGGAGATGTT TTCCGATGAA
AGGAATGTGC GTGCGGCCGA GGCCGCGTAC CGGGAGATGA GCGCATGA
 
Protein sequence
MFEVRIHSRG GQGGVTAAKL LAGAALHDGK YATACPFYGA ERRGAPVVSF VRIDDRPIKI 
YSQIREPDLV VVLDASVMET VDVLHGLKTG GRVFVNSAHP REFAGYRAAH ADLTGIALKE
SLVVAGSPIL NTPVIGALAK AGIVSPGSAT AAIREMFSDE RNVRAAEAAY REMSA