Gene Mboo_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0169 
Symbol 
ID5411707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp166726 
End bp168027 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content58% 
IMG OID640867384 
Productphenylacetate--CoA ligase 
Protein accessionYP_001403335 
Protein GI154149717 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA AAAAATACTG GGACAAGGAA ATAGAGACCA TGCCCCGTGA CAAGCTGGAG 
AAATACCAGC TCAGGCTGCT CAAGAATGAA ATTGCCTTTG CCCGCAAGGG ATCGGCATTT
TACAAGAAAT ACCTCCCGGA TATCACCCTC AAATCGATCG ACGATATCCA AAAACTCCCG
TTTGTGACCA AGCAGATCAT CCGGGAGCGC CAGCAGGCAA AAGAGCCCTT TGGTGACATG
GTTGCGGTCC CGGAAGAAGA GATCGTGTAC ATCTCTGCAT CGAGCGGCTC GACCGGTGTC
CCGACCGCTT CGCCGTTTAC CGCACAGGAC TTCGATGACT TCATCGACTG CCAGGCCCGG
CTCTTCTGGA GAAGCGGGAT GCGCCCGAAG GACCGGTACA TCCATGCCCT GAACTTCTCG
CTTTTCATTG GCGGGCCGTG CGTGCTTGGC GCACAGAGAC TGGGGGCACT TGCCATCCAC
GCGGGCTCGA TCCCCTCGGA ACGCCTGCTC AACTTTGTCA GGCAGTTCAA GCCCAACTGG
ACCTGGACTA CGCCGTCCTA TGCGTGGTAC CTGGGTGAGA CCGCAAAAAA TGCCGACCTC
AACCCGGCAA AGGACTTGAG CCTGCGCAAT TTCATCTGCT CGGGCGAGCC CGGCGGCGGG
ATCAAGGAGA CCCGGGAGAA CATCGAGGCG CTCTGGGGCG CAAACCTGTA CGAATATTAT
GGCCTCTCGG ATATCTTTGG GGCCTGCGCC GGGTCGTGCA CGGAGAAGTC CGGGATCCAT
ATCGAAGAGG ATCACATGAT AGTCGAGGTC CTTGACCTCA AGACCGGGGA GCCGGTCGGG
GAAGGGGAGC GTGGCGAGAT GGTGCTCACC ACCTTAAAGA AGCGCGCCCG CCCGCTCATC
CGGTTCCGGA CCGGGGATAT CGTCACGTAC ACTGACGAGA AATGCAACTG CGGCCGGACC
CACAAGCGCC TGTCCGGTGT CCACGGGAGG ACCGATGACA TGCTCATCAT CAAAGGTGTG
AATGTCTTCC CCAGCGACGT CGAGGCAGTG GTCCGGAGCC TGGACTTTTT GACCGGCGAG
TACCGCCTGA TCGTTGACCG TGAGAAACAC CTCGATACTC TCGCCATCGA AGTCGAGAAC
ACGAAAAAGA CGATCCCCGA GGTCCAGGAT ATCCTTGCTA CCGCAATTAA GGCCCGGCTC
GGTGTGAAGG CTGATATCAT CGTCCACAAG CCCGGCACGC TCCCCCGCGA GACCCACAAG
GCAAAGAGGA TTATCGACAA GAGAACCAAG GTCTGGGGAT AA
 
Protein sequence
MTEKKYWDKE IETMPRDKLE KYQLRLLKNE IAFARKGSAF YKKYLPDITL KSIDDIQKLP 
FVTKQIIRER QQAKEPFGDM VAVPEEEIVY ISASSGSTGV PTASPFTAQD FDDFIDCQAR
LFWRSGMRPK DRYIHALNFS LFIGGPCVLG AQRLGALAIH AGSIPSERLL NFVRQFKPNW
TWTTPSYAWY LGETAKNADL NPAKDLSLRN FICSGEPGGG IKETRENIEA LWGANLYEYY
GLSDIFGACA GSCTEKSGIH IEEDHMIVEV LDLKTGEPVG EGERGEMVLT TLKKRARPLI
RFRTGDIVTY TDEKCNCGRT HKRLSGVHGR TDDMLIIKGV NVFPSDVEAV VRSLDFLTGE
YRLIVDREKH LDTLAIEVEN TKKTIPEVQD ILATAIKARL GVKADIIVHK PGTLPRETHK
AKRIIDKRTK VWG