Gene Mboo_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0168 
Symbol 
ID5411706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp165505 
End bp166707 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content60% 
IMG OID640867383 
Productaminotransferase, class I and II 
Protein accessionYP_001403334 
Protein GI154149716 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAGGA TCATCTCATC AGCAACCCCT CCCCGACCGG GTACTTCCCG TACCCCGGTG 
CGGCCGCTTT CTGTTTCCCG TGCTGACAGA TTTACTGAGT CCGTCATCCG CGAGATGACC
CGGCTCTCCC TGCAGTACGG TGCGGTTAAC CTTGCACAAG GATTCCCGGA CTTTCCCTGC
CCGGATGAAC TCAAAGCCGC TGCGTGCCAG GCCATCAACG CTGACATCAA CCAGTACGCA
ATCACCTGGG GGGCACCCGA GCTCCGCGAG GAACTCTCCC GCCGGGTGAA AGCCTACAAC
GGTATGGAGT TTGATCCGGC AACCGGTGTC ACGGTCACCT GCGGCTCGAC CGAGGCAATG
CTTGCCTCGC TCATGGCGGT GATCCGGCCC GGCGAGGAAG TGGTGGTGCC CGAACCGTTC
TACGAGAACT ACGGCCCCGA CACGATCCTC TCCGGCGCCG TGCCCCGGTA TGTCTCCCTT
GGCGACGATT TCTCGATCGA CGAGGAGGCA TGGAAGGAGG CATTCAGCAA AAAGACCCGC
GCAGTCGTGA TCAACACGCC CAACAACCCG ACGGGGAAAG TCTTCTCGAA AAAGGAACTC
TCGTTTATTG CCGACCTCTG TGTTGAGAAC AACGCGATCG CGATCACCGA TGAGATCTAC
GAGCATATCC TGTACGACAG GAAAAAACAC GTTTCAATCG GCTCTCTCCC CGAAATGCAG
GACCGGACGA TCACCCTCGG GAGCTTCTCC AAGACCTACA GTGTGACCGG CTGGCGGGTC
GGGTACGCGC TTGCCCACCC CGAACTTACC GGGCGGATCC GCAAGATCCA CGATTTCTTG
ACCGTGGGCG CCCCGGCACC GCTCCAGCAG GCCTGTGCCG CTGCACTGCG CCTGCCCGAA
TCCTATTACC GGGAGCTTGC CGAAAGTTAC GACAGAAAAC GCCGGATCCT CTTTGCGGGC
CTCAAAAAAG CCGGGTTCTC CTGCACGCTC CCTGAGGGGG CGTACTACAT CTTCACTGAC
ATCTCCGAAT TCGGGAAGAC CGATGTGGAG TTTGCCCGTC ACCTTGTGCA GACTGCCGGG
GTTGCCGCAG TCCCGGGAAG CTCGTTCTAC CACACCGGTG GAGAAACAAA ACTCCGGTTT
ACGTTCTCGA AAAAAGACGA GACCCTGCAG GAGGCCTGCA GGCGCCTCGA AACGATCGCA
TAA
 
Protein sequence
MARIISSATP PRPGTSRTPV RPLSVSRADR FTESVIREMT RLSLQYGAVN LAQGFPDFPC 
PDELKAAACQ AINADINQYA ITWGAPELRE ELSRRVKAYN GMEFDPATGV TVTCGSTEAM
LASLMAVIRP GEEVVVPEPF YENYGPDTIL SGAVPRYVSL GDDFSIDEEA WKEAFSKKTR
AVVINTPNNP TGKVFSKKEL SFIADLCVEN NAIAITDEIY EHILYDRKKH VSIGSLPEMQ
DRTITLGSFS KTYSVTGWRV GYALAHPELT GRIRKIHDFL TVGAPAPLQQ ACAAALRLPE
SYYRELAESY DRKRRILFAG LKKAGFSCTL PEGAYYIFTD ISEFGKTDVE FARHLVQTAG
VAAVPGSSFY HTGGETKLRF TFSKKDETLQ EACRRLETIA