Gene Mboo_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0164 
Symbol 
ID5411544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp160799 
End bp161626 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content60% 
IMG OID640867379 
ProductABC transporter related 
Protein accessionYP_001403330 
Protein GI154149712 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA TCGAACTGCA GGATATCAGC ATGGTGTTCG GCCTCAACGG CAGCAACCAC 
GAGGCGCTCA ACAAGGTCTG CCTGCACATC CGGGAGGGTG AGTTTATCTC GCTTATCGGG
CCCTCGGGCT GTGGCAAGAG CACGATCATC GACGTTGTCT CGGGGCTGCG GGCCCCGACC
ACCGGCCGAG TCCTCATCGA TGACCAGCCG GTGACCGGGC CCGGGACAGA CCGGGGAACC
GTGTTCCAGG ACTACTCGCT CTTTCCCTGG ATGACCGCGT TTGAGAACCT CCGGTTTGCC
ATTGAGCACG CCAACGGGAA AAGGGATCCG GATTCGTTCG ATGCCGAGGC AGAGCGGTTC
CTGAAACTGG TCGGCCTGGA AAAATTCCGC AACGCGTACC CCAACACCCT GTCCGGCGGG
ATGAGGCAGC GGATCTCGAT CGCGCGGATG TTCTCCTTAG ACCCGAAGGT GTTTTTGATG
GATGAGCCCT TCGGGGCCCT TGATTCCCTC AACCGGATCT ATATGCAGGA TCTTTTGCTC
CGGCTCTGGA CCCGGGGGGA GAAGAGGAAG ACCGTGCTCT TTGTCACCCA TGACGTGGAT
GAAGCATTAC TCCTCTCGGA CCGGATCGCG ATCATGTCTC CTTCCCCGGG CAGGATCAAG
GAAGTGATCG AGATCCCGTT TGAACGCCCG CGGTGCAGGA AGACACTGGG GGCACAGCCC
GAGTACCTTG CGCTCAAGTC CCATCTTCTC TCGGTACTCT ACTGCGAGAT GCTTGATGAC
CTCGATCGCC AGCTCGAAGA GCCGGTTGCC GGGGGGACAC CGGCATGA
 
Protein sequence
MATIELQDIS MVFGLNGSNH EALNKVCLHI REGEFISLIG PSGCGKSTII DVVSGLRAPT 
TGRVLIDDQP VTGPGTDRGT VFQDYSLFPW MTAFENLRFA IEHANGKRDP DSFDAEAERF
LKLVGLEKFR NAYPNTLSGG MRQRISIARM FSLDPKVFLM DEPFGALDSL NRIYMQDLLL
RLWTRGEKRK TVLFVTHDVD EALLLSDRIA IMSPSPGRIK EVIEIPFERP RCRKTLGAQP
EYLALKSHLL SVLYCEMLDD LDRQLEEPVA GGTPA