Gene Mboo_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0160 
Symbol 
ID5411540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp154607 
End bp155284 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content59% 
IMG OID640867375 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001403326 
Protein GI154149708 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACG ATGCAATAAC GGCGCTGCGT GAAGGAAAGA TGATCCTTCT GTACGATTTC 
GATGACCGGG AAGGGGAGAC GGATTTTGCG ATCCGGTCCG ATGCGGTAAC GCCGAAGGAC
ATCCTCCGGA TGAGAAAAGA TGGCGGCGGG CTGATCTGTA CCGCGATCGA CCCGGTGGCG
GCAGAGCGGC TGGGTCTGCC GTTTGCAAGC GATGCGCTCA AAAACACGCA GATCGCCGAA
CAGGAAGGTG AGATCCCGTA CGACCGTAAA AACCATTCAT CGTTCTCGCT CTGGGTCAAC
CACAAGAACA CGTTTACCGG GATAACGGAC CGGGACCGGG CGCTCACCAT TACTGCAGTG
GCCGAGCAGG TAAAAAAATC GCTCAACGGA GGCGGGGCGC ACTTTTCCGA GCACTTCCGC
ACCCCGGGTC ACTGTGCCCT CCTGCGTGCG GCCGACGACC TGCTCGACCA GCGCCACGGG
CAGACTGAAC TCTCGGTAGC CCTCGCCCGG ATGGCCGGGG TCACCCCCTC TATTACCATC
TGCGAGATGC TGGACGACGA GTCCGGTTAC GCACTCCCCA AAACCCGCGC AAAAGCATAT
GCAAAGAAGC ACGACCTTGT CTTTGTCGAA GGACGAGAGG TGCTCGACCG CTGGGAATCG
GCAAAGAAGC AGAAATAA
 
Protein sequence
MIDDAITALR EGKMILLYDF DDREGETDFA IRSDAVTPKD ILRMRKDGGG LICTAIDPVA 
AERLGLPFAS DALKNTQIAE QEGEIPYDRK NHSSFSLWVN HKNTFTGITD RDRALTITAV
AEQVKKSLNG GGAHFSEHFR TPGHCALLRA ADDLLDQRHG QTELSVALAR MAGVTPSITI
CEMLDDESGY ALPKTRAKAY AKKHDLVFVE GREVLDRWES AKKQK