| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0147 |
|---|
| Symbol | |
|---|
| ID | 5410505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 142681 |
|---|
| End bp | 143331 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640867363 |
|---|
| Product | uncharacterized membrane protein |
|---|
| Protein accession | YP_001403314 |
|---|
| Protein GI | 154149696 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2364] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.108653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCTG CCGGACTCGC AAAGCGCTGC ATTATCCTTC TTTGCGGCCT TTTTCTCATG
GGCCTTGGAA TAAGCCTTGT CGTCCGCTCG ACCCTTGGGA CCTCTCCCAT CTCAAGCGTC
CCCTACGTGC TCAGCCTTGC CTTCCCGCTC ACGTTTGGCG AGTTCACCTT CCTTATCACC
CTGATCTTCT TTATCGCCGA GATCGCAATC ATAGGAAAGG ATTTTCCCCG GCCCCAGTAC
TTCCAGATCC TCATAGCCCT GCTCCTTGGC ACTTTTGTCG ATGTGGGTAT GTTCCTTTCT
GCCGGCGTCC AGCCGGGGAT CTACCCGGAA CAGATCGCCA TCGTATTCCT AGGTTCCGCC
GTCCTTGCCC TTGGGATTTT TTTGCAGATC ACGGCAAATG TCATTTTGAA CCCGGGCGAA
GGCCTCGTGC GGGCCATTGC GGAAAAGACG CACAAACGTT TTGGGATCAT CAAGGTTATG
TTCGACACCT CTCTTGTGGC AGGCGCCGCC GTCATCTCGT TTGCAGCGTT TGGGACCATC
GAGGGTTTAA GGGAAGGGAC CGTCATCTCA GCAGTCCTTG TCGGGTACAT CATCCTCGGC
TTTGCCCTCT GTTATACCCG GTACGATCTC GGGAGATTCC TCAGCGATTA A
|
|---|
| Protein sequence | MSSAGLAKRC IILLCGLFLM GLGISLVVRS TLGTSPISSV PYVLSLAFPL TFGEFTFLIT
LIFFIAEIAI IGKDFPRPQY FQILIALLLG TFVDVGMFLS AGVQPGIYPE QIAIVFLGSA
VLALGIFLQI TANVILNPGE GLVRAIAEKT HKRFGIIKVM FDTSLVAGAA VISFAAFGTI
EGLREGTVIS AVLVGYIILG FALCYTRYDL GRFLSD
|
|---|
| |