Gene Mboo_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0145 
Symbol 
ID5410503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp140711 
End bp142135 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content58% 
IMG OID640867361 
Productamino acid permease-associated region 
Protein accessionYP_001403312 
Protein GI154149694 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.270718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACGCACCGGT AGTAAACAAA AAGGTGCTCG GCGTTTTTGC GCTTGCCATG 
ATCAACGTGG CGGCCGTGCT GAGCATCAGG AATTTCCCGT CCATGGCAAT CTACGGGTGG
TCGTGTATCG GCTGGTACAT CCTTGGGACT ATCCTGTTTT TGATCCCCAT CTCCCTTGCG
GGGGCAGAAC TGGCAACCGG CTGGCCCGAA GGCGGCGGTG TGTACGCGTG GGTCAAGCAG
GCATTCGGCG AGAAAGGGGG ATTTACCGCC CTTTTCTGCG AATGGTCCAA CAACCTTGTC
TGGTTCCCGA CCGTGCTCTC GTTTACCGCA TCCACGCTCG CGTTTGCACT CACCCCGAAC
CTGGCGAGCA ACCCCTGGTT CATGTTTTCC GTTATGATGA TCGTGTTCTG GGGCACCACG
GCCATTGCGT ACTTCGGTGA GGAGGCATCC GCAAAATTCT CCAACGTGGG TGTGATCCTG
GGGAGCATCG TCCCTTCGCT CCTCATCATC ATCCTTGGCC TCTGGTGGCT GGGTTCGGGC
CAGGCTATTG TCCTGCCGCA CTTTTCATTT GGCCAGGTCG TACCGACGAT CAATCTCTCC
ACGCTTCCGT TCTTTGCCAC AGTCGTTCTC CTCTTTGCCG GCATGGAGAT GGCCGGGTTC
CATGCGCTTG AGACAAGAAA TCCCCAGCGG GACTACCCCA AGGCCATGGC GCTCTCGGCC
GTGATCATTG TGATTTGCAC GGTCCTTGCA ACGCTTGCCA TTGCGATTGT TATTCCGGCA
AGCCAGCTCA ACCTCGCCTC CGGGGTCATG CAGGCGATCC AGTACTTCTT TGACGCGTCC
GGGATCGCAT GGCTTGTCGG CCCCATGGCG CTTCTGATCA CGCTGGGCGG TGTCGTGAAT
CTTGCTTCCT GGCTTATTGG CCCGGCAAAG GGTCTTGGGA TCGTTGCAGA AGAGGGCAAC
ATGCCCCCGA TCTTTGACCG GACCAACAAG TACGGCGCAC CGGTTGCGGT GCTCGTCATC
CAGGCGCTGA TCGGCTCGGT GGTCTCGCTT CTCTATGTCT TTTTGCCTTC GGTCAACCAG
GCGTACTGGA TCCTTTCGGC AATGACGGTC GAACTGCTCT GTATCGTGTA CATCCTCGTC
TTTGCCGCGC TCATCAAGCT GCGGTACAGC CAGCCGGATA CGCCCCGGCC CTTTAAGATC
CCGGGCGGGA AGACCGGCAT CTGGATTGTC GGGGGACTGG GGCTGTTTGG CACGACCTTT
GCCTTTATTG TCGGGCTCAT GCCACCGTCA TTTTTCACCA GCTGGGTCAC CTATGTCTCC
GCGGTGCTGC TGGGAACGTT CCTCTTAGCC GTGCCCCCGC TTGTCTTTTT AAAATTCAAG
CATCCGGGCT GGTCCAAAAA AACCCAGGGA GGTTCAAACC CATGA
 
Protein sequence
MSDDAPVVNK KVLGVFALAM INVAAVLSIR NFPSMAIYGW SCIGWYILGT ILFLIPISLA 
GAELATGWPE GGGVYAWVKQ AFGEKGGFTA LFCEWSNNLV WFPTVLSFTA STLAFALTPN
LASNPWFMFS VMMIVFWGTT AIAYFGEEAS AKFSNVGVIL GSIVPSLLII ILGLWWLGSG
QAIVLPHFSF GQVVPTINLS TLPFFATVVL LFAGMEMAGF HALETRNPQR DYPKAMALSA
VIIVICTVLA TLAIAIVIPA SQLNLASGVM QAIQYFFDAS GIAWLVGPMA LLITLGGVVN
LASWLIGPAK GLGIVAEEGN MPPIFDRTNK YGAPVAVLVI QALIGSVVSL LYVFLPSVNQ
AYWILSAMTV ELLCIVYILV FAALIKLRYS QPDTPRPFKI PGGKTGIWIV GGLGLFGTTF
AFIVGLMPPS FFTSWVTYVS AVLLGTFLLA VPPLVFLKFK HPGWSKKTQG GSNP