Gene Mboo_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0141 
Symbol 
ID5411204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp134501 
End bp135064 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content49% 
IMG OID640867357 
Producthypothetical protein 
Protein accessionYP_001403308 
Protein GI154149690 
COG category[S] Function unknown 
COG ID[COG3431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATT ATAAAGGTAC GGATCGGGTC AACGGCCGGG TAGACAATAT CGCTAATACC 
CCGGGAATTT TTCCCGGAGA TTATTTATCC ACGGCTCGGA CACATTTTGC TATGGACGCG
ACCACAATCT TAAAAAAATT TGAGACCATC GTGTACTACA TCCTCATCAC ACTCTTTGCG
ATCATTGTTG CCTGCTCGCT TGGAGAATTA ATCTACATTG TGTACGAGGC GCTCTTTGTC
AATTCCCCGC TGCTCCTGGA AAACAGCGAG CTTTTAGGCA TCTTTGGGTA CTTCCTTCTG
GTACTGATCG GTGTCGAGCT GCTGGCAACG GTCGTGGCAT ATATCAACGA GAAGGTGATC
CACGTTGAGG TGGTAATCAT GATCGCCATC ATCGCAATTG CAAGAAGTGT AATCCTTCTC
GACACCGTGA ACACGGATCC CATGGATATG TTCGGGATCG CTGCGATCAT CATTGCACTC
TGCGCCGGGT ACTTTCTCCT CAGGAAAGGG GGACTCAGGC AACAGAGAGA ATATAACCCG
CCAAACGCTC GGGTACCGGA GTAA
 
Protein sequence
MPNYKGTDRV NGRVDNIANT PGIFPGDYLS TARTHFAMDA TTILKKFETI VYYILITLFA 
IIVACSLGEL IYIVYEALFV NSPLLLENSE LLGIFGYFLL VLIGVELLAT VVAYINEKVI
HVEVVIMIAI IAIARSVILL DTVNTDPMDM FGIAAIIIAL CAGYFLLRKG GLRQQREYNP
PNARVPE