Gene Mboo_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0140 
Symbol 
ID5411203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp133874 
End bp134215 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID640867356 
Producttranslation initiation factor IF-1A 
Protein accessionYP_001403307 
Protein GI154149689 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGTT TTCACAGGAA AGATGATACA GGTGCAGCAG ATCCGAATGC ATTAAACCCG 
GATGGTACTC CGGTCTGCCG CGTTCGCCTG CCCAAAAAAT GGAACAACGA ACAGTTTGCC
CGTGCTGAAA CAATGCAGGG GGCAAACCAT ATCCGTGTCC AGTGCATGGA CGGGGTCTCC
CGCATGGGCA GGATTAAGGG AAAAATGAAA AAACGGCAGT GGATCCGGGA AGGCGACACC
ATCCTTATCG TGCCCTGGAG TTTTCAGGAT GACAAGTGCG ATATTATTTA CCGGTATCTC
AAGCCTCAGA CCGATTGGCT GAGGAAGAAC CGGTACATTT AA
 
Protein sequence
MVGFHRKDDT GAADPNALNP DGTPVCRVRL PKKWNNEQFA RAETMQGANH IRVQCMDGVS 
RMGRIKGKMK KRQWIREGDT ILIVPWSFQD DKCDIIYRYL KPQTDWLRKN RYI