Gene Mboo_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0125 
Symbol 
ID5410065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp114830 
End bp115366 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID640867340 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001403292 
Protein GI154149674 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTG ATACACCTGC GGATGGCAGC GACAATATCG CCTTCCAGAT TGGCCAGCTC 
GATGATCCTT CCATCGACAA CCGCCACCAT GCGATCCTTG TACTGGCAGA GGCCGGGGAG
GCTGCCATAG GGCCCCTGAT CCAATCCCTT GCCGACGCAG ACAGCGACGA TAGCCGCTGG
TACCGGGCAG TCGCGCTTGC CCGGATCGGC GTGCCTGCGA TCGCCCCGGT TATTGCAGCC
ATGAAGGGCA ATACCGGTTT TGAGTTCCGG CGTTACGCTG CATCCGCGCT CGGCGAGCTC
GGAGAACCGG CGGTGGAACC ACTCATTGAC GCCATGGGAA GCGATGATAA GGAACTGCGG
GGTTTTCTCT CCAAGGCGCT GTGCCGGATC GGGAAGCCTG CGGTAGCCCC GCTCACGCGG
CGCCTCTCGG ATGCGGACGA GATCATACGC TCCTGCGCCA CGCTCACTCT CTGGCAGATG
GGCGAGACCG GCCTGCCTTC TGTAATTGAT CAGATCCACA AGGAAAAACC GGACTGA
 
Protein sequence
MTPDTPADGS DNIAFQIGQL DDPSIDNRHH AILVLAEAGE AAIGPLIQSL ADADSDDSRW 
YRAVALARIG VPAIAPVIAA MKGNTGFEFR RYAASALGEL GEPAVEPLID AMGSDDKELR
GFLSKALCRI GKPAVAPLTR RLSDADEIIR SCATLTLWQM GETGLPSVID QIHKEKPD