Gene Mboo_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0118 
Symbol 
ID5411292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp108281 
End bp109486 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID640867333 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001403285 
Protein GI154149667 
COG category[R] General function prediction only 
COG ID[COG1078] HD superfamily phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.835732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCCA AGATCATCAA GGACCCGGTT CATGGCTATG TGGAGGTGGA CGAGGATATC 
CTCCCTCTCC TCGACGCCCC CGGCATCCAG CGCCTGCGCT ATATCCGGCA GCTCGGCTTT
TCGTACCTTG TGTATCCCGG CGCCACCCAC ACGCGCTTTG AGCATTCGGT AGGCACCATG
CACCTGGCCG GAATTGCCTG CCGGGAATTC GATCTTGCAG ACGACGAGCG CCGGCTGGTG
GTGGCCGCCG CCCTCCTCCA TGATGTGGGA CACGGCCCCT TCTCCCATGC AAGCGAACCT
CTCATGGAAG CATGGCTCGG ACGCACCCAC GATGATATTG CCGGGATCGT GGAAGTGCAG
TTCGGCTCGC TCCTTGAACC TCTCGGGATC AGCCCGGGCG AGATCGGAGA TGTGGTCAGG
GGCCGCCACC GGCTTTCGGG GATCATCCAC GGGGATCTCG ATGTAGACCG GATGGATTAC
CTGCTCCGCG ATGCGTACTA TACCGGTGCA CCGTACGGCA CGGTGGATGC CCACCGTCTC
ATTATGAACC TGCACCTGAC ACCTGACGGT GTCGTACTTG ATGAAAATGG TATCAATGCC
GCAGAATCCC TGCTCATTGC CCGGACCCTG ATGCGCCCGA CAGTATACTA CCATCATGTC
AGCCGTATCG GTGAATGCAT GTTCCAGCTG GCCTTGCTCA GTCATATGGC GACCGATCCG
GCCGGAGGCT TTGAACGTAT CTGCGCCCTT GACGATGGGG AATGTATGCT TGACCTTCGG
CGATCGCAAA GCACCCTTGC CCGGGAGATT GCCGGCAGGC TGTACGAACG ACGGCTTTAC
AAACGGGCCG TGTATGCCGG GCAGGACCAG GTGAACGCGG CTGCATTCCA GACCGGCTGG
ACCCTGGATC GGGCCCGCGA TGTGGCAAGG GAGATTGCCG AAACGGCCGG TTGCCGTGAA
AACGATGTGC TGGTGGATAT CCCGCCGCCT CCGGGGGAGA TGACGCTTGA GGTACAGGTA
AAGAACCGGG ATACCACCAC CGGGTTTGCA GAGTTCTCTC CCCGCCTGCA GATGCTCAAT
GAGACCCGGC GGGAGCAGTG GCGGCTGGGG GTGTATACCC TTCCGGAGCA CCGGGCGGCA
GTGGCCGATG CCGCCACAGA GATCCTGCAT GTGAAAAAAC CCACCCGTCA GGGTACCCTT
TTCTGA
 
Protein sequence
MSPKIIKDPV HGYVEVDEDI LPLLDAPGIQ RLRYIRQLGF SYLVYPGATH TRFEHSVGTM 
HLAGIACREF DLADDERRLV VAAALLHDVG HGPFSHASEP LMEAWLGRTH DDIAGIVEVQ
FGSLLEPLGI SPGEIGDVVR GRHRLSGIIH GDLDVDRMDY LLRDAYYTGA PYGTVDAHRL
IMNLHLTPDG VVLDENGINA AESLLIARTL MRPTVYYHHV SRIGECMFQL ALLSHMATDP
AGGFERICAL DDGECMLDLR RSQSTLAREI AGRLYERRLY KRAVYAGQDQ VNAAAFQTGW
TLDRARDVAR EIAETAGCRE NDVLVDIPPP PGEMTLEVQV KNRDTTTGFA EFSPRLQMLN
ETRREQWRLG VYTLPEHRAA VADAATEILH VKKPTRQGTL F