Gene Mboo_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0114 
Symbol 
ID5411288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp104069 
End bp104728 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID640867329 
Producthypothetical protein 
Protein accessionYP_001403281 
Protein GI154149663 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAG AAGAGATCCT GAGCGATACC CTCATCTCGA AGAACCGGCT CGAGGCACTG 
GTGGACGGGG TTTTTGCCTT TGCCATGACC CTGCTTGTGG TTGGCTTAAG CGTTCCCACC
ATCCCCAAGG CCGAGGCTGC AACCGAACTG CCCGCGTACG TGGCCTCCAT GTTCCCGCAG
TTCCTCAGCT TCCTGATCGC CTTTTTTATC CTCGCCAGCC TCTGGATCGT CCACCACGAA
CACTTCCATT TTCTCCGGTC GGTTGACAAG ATCGTGCTCT GGCTCAATAT CCTGATCCTG
ATCTTCGTGG TACTGGTGCC GTTCTCCACC AACCTTTCCG GGGATTATCC GCATGTCCCA
ATCGCGCCCC TCATCTTCCA TGCAAACATG CTGATACTCA GCACCCTTTT CCTTATCCAC
TGGCAGTATA TCATCCGGCA GCCGGCCCTT CTCACCGGAC CTATCCATCC CGACCGGATC
CTGGATGCGG TCATGGACCG GGTCCCGATC ATTGTTGCCG CCCTGGTCGG TATGGCCGTT
GTCCTTGCAA ACGGACCGAT CTCTTCCATG TACATGTACC TGATCTTCCC GCTCCTGATG
AGGATCGTGA TGTGGTATAT CCATTCCCGG CGGGCCGCAA AAAGGGCGTC CCCGGCCTGA
 
Protein sequence
MESEEILSDT LISKNRLEAL VDGVFAFAMT LLVVGLSVPT IPKAEAATEL PAYVASMFPQ 
FLSFLIAFFI LASLWIVHHE HFHFLRSVDK IVLWLNILIL IFVVLVPFST NLSGDYPHVP
IAPLIFHANM LILSTLFLIH WQYIIRQPAL LTGPIHPDRI LDAVMDRVPI IVAALVGMAV
VLANGPISSM YMYLIFPLLM RIVMWYIHSR RAAKRASPA