Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0114 |
Symbol | |
ID | 5411288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 104069 |
End bp | 104728 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640867329 |
Product | hypothetical protein |
Protein accession | YP_001403281 |
Protein GI | 154149663 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAG AAGAGATCCT GAGCGATACC CTCATCTCGA AGAACCGGCT CGAGGCACTG GTGGACGGGG TTTTTGCCTT TGCCATGACC CTGCTTGTGG TTGGCTTAAG CGTTCCCACC ATCCCCAAGG CCGAGGCTGC AACCGAACTG CCCGCGTACG TGGCCTCCAT GTTCCCGCAG TTCCTCAGCT TCCTGATCGC CTTTTTTATC CTCGCCAGCC TCTGGATCGT CCACCACGAA CACTTCCATT TTCTCCGGTC GGTTGACAAG ATCGTGCTCT GGCTCAATAT CCTGATCCTG ATCTTCGTGG TACTGGTGCC GTTCTCCACC AACCTTTCCG GGGATTATCC GCATGTCCCA ATCGCGCCCC TCATCTTCCA TGCAAACATG CTGATACTCA GCACCCTTTT CCTTATCCAC TGGCAGTATA TCATCCGGCA GCCGGCCCTT CTCACCGGAC CTATCCATCC CGACCGGATC CTGGATGCGG TCATGGACCG GGTCCCGATC ATTGTTGCCG CCCTGGTCGG TATGGCCGTT GTCCTTGCAA ACGGACCGAT CTCTTCCATG TACATGTACC TGATCTTCCC GCTCCTGATG AGGATCGTGA TGTGGTATAT CCATTCCCGG CGGGCCGCAA AAAGGGCGTC CCCGGCCTGA
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Protein sequence | MESEEILSDT LISKNRLEAL VDGVFAFAMT LLVVGLSVPT IPKAEAATEL PAYVASMFPQ FLSFLIAFFI LASLWIVHHE HFHFLRSVDK IVLWLNILIL IFVVLVPFST NLSGDYPHVP IAPLIFHANM LILSTLFLIH WQYIIRQPAL LTGPIHPDRI LDAVMDRVPI IVAALVGMAV VLANGPISSM YMYLIFPLLM RIVMWYIHSR RAAKRASPA
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