Gene Mboo_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0109 
Symbol 
ID5412264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp100231 
End bp101145 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID640867324 
Producthypothetical protein 
Protein accessionYP_001403276 
Protein GI154149658 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA GCGGACCGAG GGTCAGGAAA TATCTCAGGC AGTTTGTTGC AGATCCCACA 
AAAAAGATCC GGCTTAAGAA GTACGATACT GCAAGGGTGC CAAGAAAGGA ACTCAGCGCA
GAAAGCGATG ATGAGGCAAA GGCGCTGCTC AAGGACCTTC TGGACAAAAA CCGCCAGGAA
CTGGCACGGG CGCAGGATCT CCTGGCCGCA TCCGCCCAGT ACAGCATCCT GATCGTGCTC
CAGGGAATGG ACACCTCGGG AAAAGACGGT ACGATCCGGC ACGTGATGTC AGGGATCAAT
CCCCAGGGCT GTGCAGTCCA CTCGTTCAAG GTGCCCGGTG CTGAAGAGCA CGCACACGAT
TTTCTCTGGC GGTACGAGAA AGTGCTGCCC GAACGCGGGA TGATCGGCAT CTTCAACCGC
TCGTACTACG AGGACGTGCT CGTTGTCCAT GTGCATCCCG ACCGGATGGA ATCGCTCCCC
GCGGCAATCG GGCCGGAAAA TGCCGGGTTC TGGGAGGGGA GATACAAGGA CATCAATGCC
TTTGAGAAGC ACCTGGTCCG TAACGGCACG GTTGTTTTGA AATTCTTCCT TCACATCTCC
AGAGACGAAC AGAAGCGCCG GCTGCTGGAC CGGCTCAGCC ACCAGGAAAA ATTCTGGAAG
TTCTCCTTTA CCGATATTGC AGAACGGCAG TACTGGGACC AGTACCAGGT GGCGTACGAA
GAGATGCTCT CGGCAACCTC AACCGAATAT GCCCCGTGGT TTATCGTTCC TGCGGACCAC
AAGTGGGTGG CCCGGACCGT GGTTGCCGAA GTGATCGCCT CGGCGATTGA GGGGCTCCAC
CTTTGCTACC CGGTCTTTCC CGATGAAAAA ATCCGGCAGC TCGAAAAAGC AAAGGCGGCC
CTGGAGCGGG AATAA
 
Protein sequence
MDVSGPRVRK YLRQFVADPT KKIRLKKYDT ARVPRKELSA ESDDEAKALL KDLLDKNRQE 
LARAQDLLAA SAQYSILIVL QGMDTSGKDG TIRHVMSGIN PQGCAVHSFK VPGAEEHAHD
FLWRYEKVLP ERGMIGIFNR SYYEDVLVVH VHPDRMESLP AAIGPENAGF WEGRYKDINA
FEKHLVRNGT VVLKFFLHIS RDEQKRRLLD RLSHQEKFWK FSFTDIAERQ YWDQYQVAYE
EMLSATSTEY APWFIVPADH KWVARTVVAE VIASAIEGLH LCYPVFPDEK IRQLEKAKAA
LERE