Gene Mboo_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0108 
Symbol 
ID5412263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp99033 
End bp100103 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID640867323 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_001403275 
Protein GI154149657 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACAGG CGCGACCTCT TGCGGTATAC CACCCGGTTA AACTGGACCG GGCCGGGCTT 
TCAAAAGAGG CCTTTGACCG GCTCCGGAAA GATTCCCCGG CGCTGTTTAA GGAGTCAAGC
GCGTACCAGC TGGCCCGGGC AGAGGAAGAC CTCGCAGATC ACCTTGGTGC GCTGCAGGAT
TCCCTGTCCA CCGGCAGGCC GGCCCTTTTC CTGGATTACG TACGGCGGGC CTGCATCTTT
TTTTCTATCC GGCACCTCTC GCCGCACTAT CTCCCGGACA GCCTCCTCGC ACTGCGGGAA
GTAATTGATG AGCACCTGAC CGGGGATCTC CGGGTCAATG CTGATGCATT CCTGAAAAAA
GGAATCGCAG CTGCACGGGA AACACCGATC GTACCTCCTG ACTGTTTTGA TGACCGCGAT
CCCCTGTCAG GAACCGCCCG GGAGTATCTC GATGCGCTGG TAAAAGCGGA CCGGGCACCG
GCCACAACGA TCCTTGCCGA TGCGGCAGCT TCCGGGGTTT CGGCGGATGA TCTCTCCCTC
CGCGTTCTTG TCCCGGTCTT AGAAGAGACC GGGCGGCGCT GGCTGGTGCA GGAGACAAGC
GTAGCAGAGG AACATTATAT CTCGGCTGCC GCTGCCGCCG ATCTCTTCCG GCTCAACGAA
CGCGCCCGTG CAGAACACCC CACGGTTCCC CGGGGAAAAT CCGTTATCGT TGCCGCAGCA
GAGCAGGATC TCCACGCAAT CGGGATGCAG ATGGTTGCCG GGTTTTTTGA ACGGGATGGC
TGGGATACGT ATTACATCGG GCCAAATACC CCGGCACAGA GCCTGATCCA TGCGGCCCGT
GACCGGAAAG CGGATGTAAT TGCGCTCTCC TGTTCAATGC CCGCGTACCT TTCGGCACTC
AGTTACCTGA TCCGCTCGCT CCGGGCCGAT CCGGCAACGG CACATGCAAA GATCCTTGTG
GGCGGCCGCC CGTTTGCCAC AGACCCGCCA CTGTGGCACC AGATCGGGGC CGACGGGTAC
GCAAAAGATG CAGCCGCGGC AGTTGCAGAG GCACACCGGC TCACCGGATA G
 
Protein sequence
MSQARPLAVY HPVKLDRAGL SKEAFDRLRK DSPALFKESS AYQLARAEED LADHLGALQD 
SLSTGRPALF LDYVRRACIF FSIRHLSPHY LPDSLLALRE VIDEHLTGDL RVNADAFLKK
GIAAARETPI VPPDCFDDRD PLSGTAREYL DALVKADRAP ATTILADAAA SGVSADDLSL
RVLVPVLEET GRRWLVQETS VAEEHYISAA AAADLFRLNE RARAEHPTVP RGKSVIVAAA
EQDLHAIGMQ MVAGFFERDG WDTYYIGPNT PAQSLIHAAR DRKADVIALS CSMPAYLSAL
SYLIRSLRAD PATAHAKILV GGRPFATDPP LWHQIGADGY AKDAAAAVAE AHRLTG