Gene Mboo_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0107 
Symbol 
ID5412262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp97676 
End bp99031 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content62% 
IMG OID640867322 
Productcoenzyme F390 synthetase/phenylacetyl-CoA ligase 
Protein accessionYP_001403274 
Protein GI154149656 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR03335] coenzyme F390 synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCT ACCACAACAC CGCAACCGAG ACAATGGGCA GGGCGGACCT GGACGCCCTG 
ATCGATGAGC GGATACGGTA TACGGTGCAG TATGCAAACG AGCATTCGCC GTTTTACCGG
CACTGGTTCC GGGAAAACGG CATTGATCCC GCCGGGATCC GGGTCCACGA GGACCTCCTC
ACCCTGCCGG TTATCACGGG AAAGACCATC CGCGAGCACC AGCCGCCGGC AACACCGGAC
TTCTCGTTTC TCTCCTCAGG CTGGGGCGAC ATATTCACCA TCCAGGAGAC GAGCGGGACA
AGCGGAACCC CCAAGAGTTT CTTTTTGGCC TGGGATGACT GGAGGCGGTA TGCGGAAAAA
TATTCCCGGA GTTTTGTCTC GCAGGGGCTC GGGGCCGGGG ACCGGGTAGT TGTCTGTGCA
TCGTACGGGA TGAACGTGGG CGCAAACACC ATGACCCTTG CGGCCCGGCG GATCGGCATG
ACCATCATCC CGTTTGGGAA ATGCAGTTTT TCATCCCGGG TGATCACCGC GTACCGCCCC
ACCGCGATTG TGGGCAGCGT ATTCAAGCTC CTCCGGCTGG CCCGGAGACT TGAGGCCGAG
GGGCTTGACC CAAAGGAAAC TTCGCTCACC CGGCTGATTG TCGGGGGAGA GAGTTTTGCA
GATGAGTCCC GGGAATACCT GGCCGGTGTG TGGGACTGCC CGGTGTACAA CACGTACGGC
AGCACCGAGG GGACCATGTG CGGGGAGTGC ACGGCAGTCT CGGGGCTCCA CGTGCCCGAG
GACCTTGTCC ACCTTGATAT GTACGATCCG CAGATGCAGG ACTTTGTTTC CGATGGCAGT
CCCGGGCGTG CGGTTCTTAC CACCCTCCTG CCCAAGGGGG CAAAGGCCGG GATGCTCCTT
CTCAATTACG ATACGGAAGA CACCACAACG ATCCTCTCCC GCACCACGTG CGCCTGCGGC
CGGACGCATA TGCGGATTAC CCCCCCGCAG CGGGAGGCCG AGATCGTCCG GATCTTTGGC
ACCCCGGTGA ACCGGGTGGA CATCGAGGCC TCTGTCTTCC AGCACGGGAA CATGGAGGCA
CTCACCGGGG AGTACGAAGC ATTTGTGTAC GGGGGAAGTG CCCCGGGAAA GGTCATCATC
AAAACGGCTA TGGAATGCCC GGACCCGGAA AAGATCGATC AGCGGCAGGT AGCCGAGACC
TTTACCGCCT GCCTTACACG GCGGCGGCGC ACGCTCGCAC CGTTCCTTGC CGACCAGTCC
CTTGTTCTCG AATTCTCGTT TGTCCGGCCC GGGGGCCTTG AGCTGCAGGT AGCAAAGGGG
CGGCCCCGGC GGCTGACCGA TCGCCGTACG GCATGA
 
Protein sequence
MPGYHNTATE TMGRADLDAL IDERIRYTVQ YANEHSPFYR HWFRENGIDP AGIRVHEDLL 
TLPVITGKTI REHQPPATPD FSFLSSGWGD IFTIQETSGT SGTPKSFFLA WDDWRRYAEK
YSRSFVSQGL GAGDRVVVCA SYGMNVGANT MTLAARRIGM TIIPFGKCSF SSRVITAYRP
TAIVGSVFKL LRLARRLEAE GLDPKETSLT RLIVGGESFA DESREYLAGV WDCPVYNTYG
STEGTMCGEC TAVSGLHVPE DLVHLDMYDP QMQDFVSDGS PGRAVLTTLL PKGAKAGMLL
LNYDTEDTTT ILSRTTCACG RTHMRITPPQ REAEIVRIFG TPVNRVDIEA SVFQHGNMEA
LTGEYEAFVY GGSAPGKVII KTAMECPDPE KIDQRQVAET FTACLTRRRR TLAPFLADQS
LVLEFSFVRP GGLELQVAKG RPRRLTDRRT A