Gene Mboo_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0092 
Symbol 
ID5411086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp83802 
End bp84314 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content58% 
IMG OID640867306 
Productputative RNA-binding protein 
Protein accessionYP_001403259 
Protein GI154149641 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2016] Predicted RNA-binding protein (contains PUA domain) 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAAA GGACAATGAA AAAGATCATC GCAAAAAAGC GGCATTCTAT CAGAAAAAGC 
CAGGTAGAGG ATCTCTTTAG CCGGCTCACA CTCCAGATCG GCCCCTCGGC AGCGCTCTTC
CGTTCCGACA TGATCGAGAT CCTGGAAACC TCCTCGGATA TCGCCATCTT CCTCGTGAAC
AAAAAACCGC TCCTGATGGA TACGGGCGAA TGGGCCTTTC CCACGCTCAA AGGGGCGGTG
CAGTGCCCGT TTCCCGAGCG GATGGTGACC GTTGACGCCG GGGCGATCCC GTACGTGGTA
AACGGGGCCG ATGTGATGCG GCCGGGCATT GTCGCAGTCA GCGATGATGT GGCAGCAGGC
GGCCCGGTCC AGATCGTGGA CGAGCGGCAC AAAAAGCCCC TCGCTATCGG GGTCGCGCTC
CTGGACGGGG CGGCAATCCG GGCGAGCGCA CAGGGAAAGA TGTGCAAGAA TTTCCACCAT
GTCGGCGACG AACTCTGGAA TCTTGAACTG TAG
 
Protein sequence
MVERTMKKII AKKRHSIRKS QVEDLFSRLT LQIGPSAALF RSDMIEILET SSDIAIFLVN 
KKPLLMDTGE WAFPTLKGAV QCPFPERMVT VDAGAIPYVV NGADVMRPGI VAVSDDVAAG
GPVQIVDERH KKPLAIGVAL LDGAAIRASA QGKMCKNFHH VGDELWNLEL