Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0092 |
Symbol | |
ID | 5411086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 83802 |
End bp | 84314 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867306 |
Product | putative RNA-binding protein |
Protein accession | YP_001403259 |
Protein GI | 154149641 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2016] Predicted RNA-binding protein (contains PUA domain) |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAAA GGACAATGAA AAAGATCATC GCAAAAAAGC GGCATTCTAT CAGAAAAAGC CAGGTAGAGG ATCTCTTTAG CCGGCTCACA CTCCAGATCG GCCCCTCGGC AGCGCTCTTC CGTTCCGACA TGATCGAGAT CCTGGAAACC TCCTCGGATA TCGCCATCTT CCTCGTGAAC AAAAAACCGC TCCTGATGGA TACGGGCGAA TGGGCCTTTC CCACGCTCAA AGGGGCGGTG CAGTGCCCGT TTCCCGAGCG GATGGTGACC GTTGACGCCG GGGCGATCCC GTACGTGGTA AACGGGGCCG ATGTGATGCG GCCGGGCATT GTCGCAGTCA GCGATGATGT GGCAGCAGGC GGCCCGGTCC AGATCGTGGA CGAGCGGCAC AAAAAGCCCC TCGCTATCGG GGTCGCGCTC CTGGACGGGG CGGCAATCCG GGCGAGCGCA CAGGGAAAGA TGTGCAAGAA TTTCCACCAT GTCGGCGACG AACTCTGGAA TCTTGAACTG TAG
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Protein sequence | MVERTMKKII AKKRHSIRKS QVEDLFSRLT LQIGPSAALF RSDMIEILET SSDIAIFLVN KKPLLMDTGE WAFPTLKGAV QCPFPERMVT VDAGAIPYVV NGADVMRPGI VAVSDDVAAG GPVQIVDERH KKPLAIGVAL LDGAAIRASA QGKMCKNFHH VGDELWNLEL
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