Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0088 |
Symbol | |
ID | 5411060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 81288 |
End bp | 82280 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640867302 |
Product | phosphoribosylformylglycinamidine cyclo-ligase |
Protein accession | YP_001403255 |
Protein GI | 154149637 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.457574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA ACGCATACAG CGAGGCCGGG GTCGATATTG ATCTCGAAGC AACCGCGATC AAGGCTCTTA TCAAAAACCT GACCTACCGC CGGAAAGGCA ACTACACGAT GCTTGGTAAC GTCGGCCACT TTGCCGGCCT TATCGACTTT GGGCCAAAGG CGCTTGCCCT CACTACCGAT GGCGTAGGGA CAAAGATGCT CATTGCCGAC AAACTGGGGG ACTGGAGCAC GGTCGGAATC GACTGCATTG CGATGAACGT CAACGACCTC TACGTGATGC ACATGGAGCC GGTTGCGTTT GTCGATTACA TTGCCACGGA CAAGCTCTCG GTGGAGAAGA TGGCCCAGAT CGGCATTGGC CTCAACGAGG GAGCACGGCA GGCAAACATC GATATCGTGG GCGGGGAGAC CGCCTCGCTT AAGGGCCTTG TAAACGGCCT CGACCTTGCC GGCACCTGTT TTGGTATCCA GGATAAAGGG AAGATCGTGA CCGGCGATAA GATCCGGCCC GGCGACAAGA TCGTGGGCGT CCCGTCCACC GGTATCCACA GCAACGGCCT CTCGCTTGCG CGGATGGTGG TGGAGAAGTA CGCGGACTAC GACGAGAAGA TCAGCACAGG AAAGACGCTT GGGCGCGAAC TTTTGACCCC GACCCGGATC TACCATGAAA GCCTGAATGT CGCTGACACC TGCACGGTGC ACGGTATGTG CCATGTCACG GGCGGGGGAC TCTTGAACTT CCTCCGGCTC TCCCGGTACG GGTTTCGGTT CGATACCCTG CTCCAGCCGC CCGCAATCTT TTCCTGGATC CAGGAGACAG GAAAGATCTC CGATGTGGAG ATGTACCGCA CCTTCAACAT GGGGATGGGG TACGCCTATG TTGTGCCGCC GGCGTCCGTG GATGCGGTGA CCGCTCTTTT GCCCGGTGCA CAGGCTGTCG GGGAAGTAAC AGAAAAACCC GGTGCATGGC TTGGGAACGT GCAGGTCACT TAA
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Protein sequence | MTQNAYSEAG VDIDLEATAI KALIKNLTYR RKGNYTMLGN VGHFAGLIDF GPKALALTTD GVGTKMLIAD KLGDWSTVGI DCIAMNVNDL YVMHMEPVAF VDYIATDKLS VEKMAQIGIG LNEGARQANI DIVGGETASL KGLVNGLDLA GTCFGIQDKG KIVTGDKIRP GDKIVGVPST GIHSNGLSLA RMVVEKYADY DEKISTGKTL GRELLTPTRI YHESLNVADT CTVHGMCHVT GGGLLNFLRL SRYGFRFDTL LQPPAIFSWI QETGKISDVE MYRTFNMGMG YAYVVPPASV DAVTALLPGA QAVGEVTEKP GAWLGNVQVT
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