Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0086 |
Symbol | sdhA |
ID | 5411058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 78204 |
End bp | 79832 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640867300 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001403253 |
Protein GI | 154149635 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.970646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAG ACGGGGTTGT GGACTGCCAT GTGCTGGTAA TTGGGAGCGG CGGCGCAGGA GTACGGGCTG CAATCGGGGC GGCCCGGTAC GGAACAACCC TGCTTCTCTC AAAGACCCTC GCGGGAAAGG GCGGGTGCAC CCCGATGGCA GAAGGCGGCT ACAATGCAGT GCTGCGCGAG GCCGACTCCT GCGAGATCCA TTACGAGGAC ACCCTGCGGG GCGGGGCGTT CCTCAACGAG CCGGAACTTG TCCGGATCCT GGTGCAGGAA TCCCCGGAGA GGGTCAACGA GCTGGTCGGC TGGGGGGCGG TCTTTGATTT CACCAATGAA TGCGAGATTG CCCAGCGTCC GTTCGGGGGC CAGCGGTTTC CCCGGACCTG CTATGCAGGT GACCGGACCG GTCACGAAAT GATGATGACG CTCATGGAGC GTTTCGATTC CTCGGGTGCG ACAAAGATGG AAGAAGTGAC CGCGATCGAT CTGCTCAAGG AAAGCGGACG GGTGATCGGG GCCTTTGCCC TTGACGAGAA CGGGGACGAG GTGATCATCA CCGCGGACAG CACCATCCTT GCTACCGGAG GGGGTTCCCG GGTCTATGAC ATTTCCACGA ACTCGTCGAG CGGCACCGGG GACGGCTTTG CTATGGGCTA CCGGGCCGGG GCCGAACTCA TCGACATGGA GATGGTGCAG TTCCACCCGA CCGGCGCAGT GTACCCCTAC GATGCCCGGG GCCGGCTCAT CACGGAAGCC GTGCGGGGCG AGGGAGGCAT TCTCAAAAAC TCTCTGGGCG AGCGGTTCAT GAAACGCTAT GACCCGGTCC GGATGGAGCT CTCCACCCGG GACGTGGTGG CCCGGGCGAT CGCTACCGAG ATTGCAGCCG GCCGGAGTAC GCCGCACGGG GGGGTGTACC TGGATGTCAC GCACCTCCCA AAAGAGCAGA TCGAGACCCG GCTCCCGCTG ATGCTCGAAC AGTTCCTGAC CTACGGGGTG GACATCCGTA CGCAGCCCAT GGAAGTAGCT CCCACCGCCC ACCACATCAT GGGCGGGATC CGGATCACGC CGAAGTGTGC AACCACCGTG CCGGGCCTCT TTGCCTGCGG TGAGACCGCC GGGGGCGTGC AGGGTGCAAA CAGGCTTGGA GGAAACGCCC TTGCCGAGAC CCAGGTCTTT GGGAAACGCG CCGGGGAGGC GGCCGGGCAG GGTGAGAGGC GGGTAAAGAA GATCGATCCC GCACAGCTGG CGGAGATCCG GGCACGGACA GAGGGCTTCC TCTCGGGAAC AAAAAACCCG GCCCATGTCA GAAAGGAACT CCAGAAAACA ATGTGGCAGG ATGCCGGTAT CTTCCGGGAC GAGGCCGGGC TTAAGCGTGC GCTTGCCACG GCAGAACATC TGCTCACAGC TCCGATCCGG GCGGCCTCTC CTGCCGGGAT TGTGGAGTGC TGCATAGTGC AGAACATGTG CCTGACGGCA GCGCTCATCT GCCGTTCGGC TCTTGCCCGG CCGGAATCCC GTGGTGCAAA CATGCGGGTG GACCTCGCAC AGGAATGGGA TGCGGAGCAC TCGCCCTACG GCCACACGTA CATCTCGAAG CACCGCCAGG GAATTTCCCG GCACGGGGTG CCGGCATGA
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Protein sequence | MRADGVVDCH VLVIGSGGAG VRAAIGAARY GTTLLLSKTL AGKGGCTPMA EGGYNAVLRE ADSCEIHYED TLRGGAFLNE PELVRILVQE SPERVNELVG WGAVFDFTNE CEIAQRPFGG QRFPRTCYAG DRTGHEMMMT LMERFDSSGA TKMEEVTAID LLKESGRVIG AFALDENGDE VIITADSTIL ATGGGSRVYD ISTNSSSGTG DGFAMGYRAG AELIDMEMVQ FHPTGAVYPY DARGRLITEA VRGEGGILKN SLGERFMKRY DPVRMELSTR DVVARAIATE IAAGRSTPHG GVYLDVTHLP KEQIETRLPL MLEQFLTYGV DIRTQPMEVA PTAHHIMGGI RITPKCATTV PGLFACGETA GGVQGANRLG GNALAETQVF GKRAGEAAGQ GERRVKKIDP AQLAEIRART EGFLSGTKNP AHVRKELQKT MWQDAGIFRD EAGLKRALAT AEHLLTAPIR AASPAGIVEC CIVQNMCLTA ALICRSALAR PESRGANMRV DLAQEWDAEH SPYGHTYISK HRQGISRHGV PA
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