Gene Mboo_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0084 
Symbol 
ID5411056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp75022 
End bp76176 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content57% 
IMG OID640867298 
Productglutaredoxin 
Protein accessionYP_001403251 
Protein GI154149633 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins
[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase
[TIGR02196] Glutaredoxin-like protein, YruB-family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.833578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA CGGTCACCGT TTATTCCACG AAAAATTGCC CGTACTGCCG GATGGCCAAG 
GCATTCCTGG AGAAGTACGG CGTTCCCTAC ACAGCCATTG ATGTCGGCGC CGATACCGCT
GCGGCTCATA AGATGATCGC GCTTTCAGGC CAGCGCGGCG TACCGGTAAT TACCGTTGAT
GACGAGGTGA TTGTCGGCTT TGACTCCCAG AGGCTCAACG AGCTTTTCGG GACCCATGCA
GCGGGAGAGA CCTACGATGT CATCATCGTT GGTGCCGGCC CGGGAGGACT TACTGCCGCG
GTCTACTGCG CCCGCAAACT CTTAAAAACG CTCGTTGTTT CCGAGAGTAT TGGCGGGCAG
GCGCTGGAAT CGTGGGCCAT TGAGAATTAC ATGGGCTACC GGATGATCAC CGGTGAAGAC
TTGATGAAGA AGTTCGAGGA GCAGGTCCGG ACCCTTGACG TGCGCCTGGA GCTCGACCGG
GTAAACGGCG TTACAATGGA GGAGAACCTG TTTGTGGTAA CAACCGTTTC CGGCCTTTCC
GTGAAGGCAA AGAGCCTGAT CCTCACCCCG GGAAAACAGC CCCGGAAACT AGGGGTTGAA
AACGAGGAGA AGTACCTCGG GCGCGGTTTG TCCATCTGCT CGACCTGCGA TGGCCCGCTT
TTTAAGGATA AGAAGATCGC TGTTGTGGGC GGCGGAAACT CGGCGCTCCA GACCGCCGTT
GAGATGAGCA GCATCGCCTC CTCCGTGAGC CTGCTTGTCC GGAGCACAAT CAAGGCGGAT
CCGGTGTACG CAAAAAAGCT TGAAGGGCTA AAGAACATTA CCGTGCACCT CCACACGCAG
ATCACCGCGC TTGCCGGCGA TCCGTTCCTC CAGCATATCA CGATTGCAAC CGAGGGCCAG
GGGGAACAGC GCATTGATGT TGATGGCGTC TTTATCGAGG TTGGCTGGAC GCCGAATACG
GAGATCTTTG ATGGCCTGGT GGAGCTCAAC GGGAAAAAGG AGATCGTGGT GGATGTGGAC
GGCCACACGA GCCGGCCCGG GGTATTTGCG GCAGGCGATG TGACATCGGT AAAGAGCAAG
CAGATCATTA TAGCTGCCGG TGAAGGGGCA AAGGCCGCGC TCGAAGCGTA CGATTACCTG
ATGAGCCTGG CCTGA
 
Protein sequence
MMSTVTVYST KNCPYCRMAK AFLEKYGVPY TAIDVGADTA AAHKMIALSG QRGVPVITVD 
DEVIVGFDSQ RLNELFGTHA AGETYDVIIV GAGPGGLTAA VYCARKLLKT LVVSESIGGQ
ALESWAIENY MGYRMITGED LMKKFEEQVR TLDVRLELDR VNGVTMEENL FVVTTVSGLS
VKAKSLILTP GKQPRKLGVE NEEKYLGRGL SICSTCDGPL FKDKKIAVVG GGNSALQTAV
EMSSIASSVS LLVRSTIKAD PVYAKKLEGL KNITVHLHTQ ITALAGDPFL QHITIATEGQ
GEQRIDVDGV FIEVGWTPNT EIFDGLVELN GKKEIVVDVD GHTSRPGVFA AGDVTSVKSK
QIIIAAGEGA KAALEAYDYL MSLA