Gene Mboo_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0083 
Symbol 
ID5411055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp73615 
End bp74907 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content59% 
IMG OID640867297 
ProductLamG domain-containing protein 
Protein accessionYP_001403250 
Protein GI154149632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG TTACCCGTCG CACCTGTTTT TGGGGAATCT TCTGGTGTGG TATCCTGGTC 
CTGCTTCTCT GCACTGCCGG TGCCGCGGCT GCTTTGGATA CGGCGGCCGG GCCGGTGGTG
TACCTTACGT TCAACGAGGG CAGCGGCGCT CTTGCACTCG ATGCGTCCGG CCACGGGAAT
ACCGGGACCA TTCATGGCAA TGCATACCGG ATTGATAACA GCGGCTGTGT ACGGGCGCTT
GTGCTTTCCG GCAATGGCAG TTATGTCTCC GTACCGTATA CCCCCGCCAA TCATCCCACG
GAGGCTATCA CGGTCTCGGC GTGGTTCTAT GTCAATGATA CGTCCCCGCA GACGCTTGTC
TCAACCTATG CGGACGGCGG GGGATACCGG CTCGGATTTG ATGAGGGAAA CGACCTCTGG
TGGACGCTCG GGCTTGACAA TGTCCGGGGA AGTGCCTCGG TGGTGATCCC GCATGAAGCC
ATCACGCCCG GGCAGTGGCA CCAGGTTACG GGATCGTACG ACGGTCAGGT AGCCCGGATC
TACCTGGACG GGATTCTCAA GAACCAGATA AATGCCACCG GTACAATCCG GTACTCCGAC
AGCAACGATA TCCTGATCGG TGCAAATGCC GGGCCAAATG ACCTGCCCGA CCCGGATGCC
CCGGAATACC TCAACGGGGC AATCGATGAG GTCAGGATCT ACAACCGGTC ACTCTCATAC
GGCGATGAGA TGGATGACCG GTATGCCTGC TCTGCTGCCA CCGGAACCGG GATCCTTTCC
CTGCCTGCAC CTCTCCCACC GGTATATCTC ACCTCGGGTT CGGTTTCCCT TGCTCCCGGG
GAGACAGCGA CACGGAGGCT GACGTTTACC AACCAGAGCG AACAGGGCAC CTGGCAGGTA
ACGGTTTCCC CTGGTTCACG ACTTTCGGTG GATGCCTCGG ATGCCTACCC CGATGTCTAT
ACGGACGAAT GGTACGTTGA GCTCAAAGAC CAGGATACCC GGCTCTCCCG CATCGTTGCT
TTCCCGGTTA CCTACAATGC CCCGGCCGCC GGAGTTATCG AATCGGGAAA TGCCACCGTA
CTTGTCCATT ACTTTGGTGG CCCGGGACGG TTCCCGGCAA GCGTGATCCT TACCTTCACC
AGCTCTGCGG CACCGGAAAG CCCGGTCTCC ACGCTGCCAA AGGAGATGCT CGAATATCCC
ATCATCGTGT TCTACTCGGC ATCCTGGGTA ACCCTGATCG CCCTTGTGGT GGTCATCGTC
TGGGCCCACC GGCGGCACAC CAAAAAAGAA TAA
 
Protein sequence
MPAVTRRTCF WGIFWCGILV LLLCTAGAAA ALDTAAGPVV YLTFNEGSGA LALDASGHGN 
TGTIHGNAYR IDNSGCVRAL VLSGNGSYVS VPYTPANHPT EAITVSAWFY VNDTSPQTLV
STYADGGGYR LGFDEGNDLW WTLGLDNVRG SASVVIPHEA ITPGQWHQVT GSYDGQVARI
YLDGILKNQI NATGTIRYSD SNDILIGANA GPNDLPDPDA PEYLNGAIDE VRIYNRSLSY
GDEMDDRYAC SAATGTGILS LPAPLPPVYL TSGSVSLAPG ETATRRLTFT NQSEQGTWQV
TVSPGSRLSV DASDAYPDVY TDEWYVELKD QDTRLSRIVA FPVTYNAPAA GVIESGNATV
LVHYFGGPGR FPASVILTFT SSAAPESPVS TLPKEMLEYP IIVFYSASWV TLIALVVVIV
WAHRRHTKKE