| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0078 |
|---|
| Symbol | |
|---|
| ID | 5411727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 70547 |
|---|
| End bp | 70954 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640867292 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_001403245 |
|---|
| Protein GI | 154149627 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGG TTGTCAAAAA ACCTGTAGCA AAACCTGTAG CAAAGAAACC TGTTGCGAAG
AAGACGGTAA AGGAACTCAA AGGGCTTGAA AAGAAGATTG GAAAAGTGCC CAAATTCTTC
AAGGAACTGA CCACAAACGA TCCCGGGATG TACGATCTGG TCATCAAGAT GGAAGACCAC
ATCTGGGACG ATGGCAAGCT CACCCGGAAA ACCAAAAAGC TGATCGCGAT CGCCATTGCA
GCGTCGCTTC GCGACCAGCA CGCGGTCCGG GCCCAGCTGA TGGGTGCGGC AAACCTTGGC
GTTACCAAGG CCGAGGTTGA GGAGGCCCTG CGGGTCTCGT TCCTTCTGGC CGGCATGCCG
GCCTATGTGT ACGGCAAGGC ACAGCTGGAT GAAGTCATGA AGAAGTGA
|
|---|
| Protein sequence | MSMVVKKPVA KPVAKKPVAK KTVKELKGLE KKIGKVPKFF KELTTNDPGM YDLVIKMEDH
IWDDGKLTRK TKKLIAIAIA ASLRDQHAVR AQLMGAANLG VTKAEVEEAL RVSFLLAGMP
AYVYGKAQLD EVMKK
|
|---|
| |