Gene Mboo_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0062 
Symbol 
ID5410271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp55641 
End bp56309 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID640867276 
Producthypothetical protein 
Protein accessionYP_001403229 
Protein GI154149611 
COG category[S] Function unknown 
COG ID[COG2881] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATTA ACATAAAAGA TCTGATGATA AATCCTGAAC GGTTTTTCCG GCAGGCGCTT 
GGTGAAAAAG AGGAACTCAG GCTCCCGGGC CTTATTATTT TCCTGGGAGC CGCGATAGCG
GCGGTATCCG GTTACCTGGC AGGCAGTCTT TCGGCCCGCA TGATGGAGCC GGTCCTGCAG
GGAATGACTC CTTTCATCAT GGCAGTCGCA GTTATTGCAG CATTTTTCGG CACATTTGTT
GCCTGGGTGA TATGGGCAGG AGTTCTTTAC CTCCTTTCCC GGGCATTTAA AGGATCGGGC
AGTTTCTCCC GGTGCCTCGA AGTAGTCGGA TATGGGTTTG TCCCCCAGAT TATCGGGATG
CTGGTAACGG TTATTGCAGC ACTGGTCTAC CTCCCTAAAG TGATCGTCCC CCCCCTCACT
TCTGCCGCCA TGCAGGACCC GCAGGTAATC AAGGAGGCCA CATCAGCACT CATGCACGAT
CCCGCGATGA TGGCATTTAC CGAAATCACT GCAGTGGTCT CGATTATTTT CCTGCTCTGG
AGCGCATCCA TCTGGATCTT CGGCCTGAAA CAGGCCCGGA ACCTGTCACT GAAGAATGCG
GCGATCTGCG TGATGATTCC GGTAATCCTG TTCATCGTTT TCCAAGCCTA CTCCCTGGCA
GGTGCCTGA
 
Protein sequence
MGINIKDLMI NPERFFRQAL GEKEELRLPG LIIFLGAAIA AVSGYLAGSL SARMMEPVLQ 
GMTPFIMAVA VIAAFFGTFV AWVIWAGVLY LLSRAFKGSG SFSRCLEVVG YGFVPQIIGM
LVTVIAALVY LPKVIVPPLT SAAMQDPQVI KEATSALMHD PAMMAFTEIT AVVSIIFLLW
SASIWIFGLK QARNLSLKNA AICVMIPVIL FIVFQAYSLA GA